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RBGRP_147

Alias: scaffold_38802

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_147_1
unknown

Not on your lists

comp(324..674)
DNA (351bp) protein (117aa)

This feature has no annotations

RBGRP_147_2

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681..2204
DNA (1524bp) protein (508aa)
Marine sediment metagenome DNA, contig: S06H3_S21153 {ECO:0000313|EMBL:GAI58469.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein
Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2REU1_ARCPA
RBGRP_147_3
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

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comp(2414..3334)
DNA (921bp) protein (307aa)
hypothetical protein Tax=RBG_13_Chloroflexi_50_21_curated
Uncharacterized protein n=38 Tax=Bacillus cereus group RepID=C2PNJ0_BACCE
hypothetical protein
RBGRP_147_4
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3490..4146)
DNA (657bp) protein (219aa)
GDSL-like protein {ECO:0000313|EMBL:CDA71247.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides c
Putative O-antigen related protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DGF7_9BACT
xylanase
RBGRP_147_5
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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4633..5466
DNA (834bp) protein (278aa)
Tax=RBG_13_Bathyarchaeota_52_12_curated
RBGRP_147_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(6399..7439)
DNA (1041bp) protein (347aa)
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE Tax=RBG_13_Bathyarchaeota_46_16b_curated
hydrogenase expression/formation protein HypE
Hydrogenase expression/formation protein HypE n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YFA3_METS5
RBGRP_147_7

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8188..8550
DNA (363bp) protein (121aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22
50S ribosomal protein L22P n=1 Tax=Ferroglobus placidus DSM 10642 RepID=D3RXT7_FERPA
RBGRP_147_8

Not on your lists


8688..9071
DNA (384bp) protein (128aa)
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S3
30S ribosomal protein S3 n=1 Tax=Ignisphaera aggregans DSM 17230 RepID=E0SPY3_IGNAA
RBGRP_147_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


9059..9313
DNA (255bp) protein (85aa)
rps3p; ribosomal protein S3P Rps3p Tax=RBG_13_Bathyarchaeota_46_16b_curated
RBGRP_147_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


9314..9610
DNA (297bp) protein (99aa)
50S ribosomal protein L29P; K02904 large subunit ribosomal protein L29 Tax=RBG_13_Bathyarchaeota_46_16b_curated
50S ribosomal protein L29P
50S ribosomal protein L29P n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12ZU4_METBU
RBGRP_147_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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9607..9888
DNA (282bp) protein (94aa)
ribonuclease P protein component 1; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
ribonuclease P protein component 1
Ribonuclease P protein component 1 n=1 Tax=Methanobacterium sp. SWAN-1 RepID=F6D7K9_METSW
RBGRP_147_12

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9888..10205
DNA (318bp) protein (106aa)
30S ribosomal protein S17, small subunit ribosomal protein S17 {ECO:0000313|EMBL:AJS13245.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps17p; 30S ribosomal protein S17
30S ribosomal protein S17P n=2 Tax=Methanopyrus kandleri AV19 RepID=RS17_METKA
RBGRP_147_13

Not on your lists


10207..10647
DNA (441bp) protein (147aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14P
50S ribosomal protein L14P n=1 Tax=Aciduliprofundum boonei T469 RepID=D3TB38_ACIB4
RBGRP_147_14

Not on your lists


10657..11187
DNA (531bp) protein (177aa)
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L26e (L24p)
50S ribosomal protein L24P n=2 Tax=Staphylothermus RepID=RL24_STAMF
RBGRP_147_15
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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11168..11950
DNA (783bp) protein (261aa)
30S ribosomal protein S4E, central domain-containing protein; K02987 small subunit ribosomal protein S4e Tax=RBG_13_Bathyarchaeota_46_16b_curated
30S ribosomal protein S4
30S ribosomal protein S4e n=1 Tax=Thermosphaera aggregans DSM 11486 RepID=D5U1Y2_THEAM
RBGRP_147_16

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11943..12482
DNA (540bp) protein (180aa)
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5
50S ribosomal protein L5P n=1 Tax=Thermogladius cellulolyticus 1633 RepID=I3TDC6_THEC1
RBGRP_147_17

Not on your lists


12677..13042
DNA (366bp) protein (122aa)
Small subunit ribosomal protein S8 {ECO:0000313|EMBL:AJS13249.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8P
30S ribosomal protein S8 n=1 Tax=uncultured marine crenarchaeote E37-7F RepID=G9BAP1_9CREN
RBGRP_147_18

Not on your lists


13070..13618
DNA (549bp) protein (183aa)
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6P
50S ribosomal protein L6P n=1 Tax=Pyrolobus fumarii 1A RepID=G0ECG1_PYRF1
RBGRP_147_19
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

13620..14171
DNA (552bp) protein (184aa)
rpl32e; 50S ribosomal protein L32e Tax=RBG_13_Bathyarchaeota_46_16b_curated
rpl32e; 50S ribosomal protein L32
50S ribosomal protein L32e n=6 Tax=Pyrococcus RepID=RL32_PYRAB
RBGRP_147_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

14310..14594
DNA (285bp) protein (95aa)
rpl19e; 50S ribosomal protein L19; K02885 large subunit ribosomal protein L19e Tax=RBG_13_Bathyarchaeota_46_16b_curated
rpl19e; 50S ribosomal protein L19
50S ribosomal protein L19e n=2 Tax=Methanothermobacter RepID=RL19E_METTH
RBGRP_147_21

Not on your lists


14560..15630
DNA (1071bp) protein (357aa)
50S ribosomal protein L18P, large subunit ribosomal protein L18 {ECO:0000313|EMBL:AJS13251.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl18p; 50S ribosomal protein L18P
50S ribosomal protein L18P n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=RL18_HYPBU
RBGRP_147_22
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


15627..16283
DNA (657bp) protein (219aa)
30S ribosomal protein S5 Tax=RBG_13_Bathyarchaeota_46_16b_curated
30S ribosomal protein S5
30S ribosomal protein S5 n=1 Tax=Fervidicoccus fontis Kam940 RepID=I0A0I3_FERFK
RBGRP_147_23
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


16284..16775
DNA (492bp) protein (164aa)
rpl30p; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RBG_13_Bathyarchaeota_46_16b_curated
rpl30p; 50S ribosomal protein L30
50S ribosomal protein L30P n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=RL30_METTH
RBGRP_147_24
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

17233..17559
DNA (327bp) protein (109aa)
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
RBGRP_147_25

Not on your lists


17688..18140
DNA (453bp) protein (151aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L15
LSU ribosomal protein L15P n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8ABZ8_IGNH4
RBGRP_147_26
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

18154..18639
DNA (486bp) protein (162aa)
preprotein translocase subunit; K10956 protein transport protein SEC61 subunit alpha Tax=RBG_13_Bathyarchaeota_46_16b_curated
SecY protein n=1 Tax=Wallemia sebi CBS 633.66 RepID=I4YGE9_WALSC
preprotein translocase subunit SecY
Displaying 26 items

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