ggKbase home page

S_scaffold_31

Alias: S_Methanogen_56_636_4

Search features with annotation key words

Displaying items 31-60 of 62 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_31_31

Not on your lists

comp(23706..24875)
DNA (1170bp) protein (390aa)
radical SAM domain-containing protein
Radical SAM domain-containing protein {ECO:0000313|EMBL:AGF93258.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Radical SAM domain protein
S_scaffold_31_32
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24937..26277)
DNA (1341bp) protein (447aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
adenylosuccinate lyase
Adenylosuccinate lyase
S_scaffold_31_33
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

26325..27311
DNA (987bp) protein (329aa)
FO synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01611};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}
cofG; FO synthase subunit 1
FO synthase subunit 1
S_scaffold_31_34
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(27298..27864)
DNA (567bp) protein (189aa)
Hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily {ECO:0000313|EMBL:ETA68807.1}; EC=4.2.1.2 {ECO:0000313|EMBL:ETA68807.1};; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrob
Fumarate hydratase class I, aerobic (EC:4.2.1.2 4.2.1.32)
Fumarase beta subunit
S_scaffold_31_35
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(27866..29005)
DNA (1140bp) protein (380aa)
hypothetical protein
CBS domain containing protein {ECO:0000313|EMBL:AEH61856.1}; Flags: Precursor;; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" s
CBS domain containing protein
S_scaffold_31_36
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(29005..30597)
DNA (1593bp) protein (531aa)
CTP synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RBG_16_Euryarchaeota_41_19_curated
CTP synthase
CTP synthase
S_scaffold_31_37
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30594..30779)
DNA (186bp) protein (62aa)
UPF0434 family protein
UPF0434 protein Nmlp_3063 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
UPF0434 protein Nmlp_3063
S_scaffold_31_38
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(30817..31776)
DNA (960bp) protein (320aa)
GTP cyclohydrolase MptA {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.39 {ECO:0000256|HAMAP-Rule:MF_01527};; GTP cyclohydrolase IV {ECO:0000256|HAMAP-Rule:MF_01527}; TaxID=1392998 species="Archaea; Eury
hypothetical protein
GTP cyclohydrolase MptA
S_scaffold_31_39
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

32202..33857
DNA (1656bp) protein (552aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE51300.1}; Flags: Precursor;; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" sour
Putative uncharacterized protein
S_scaffold_31_40
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(34155..34985)
DNA (831bp) protein (277aa)
cheR; chemotaxis protein CheR rbh
Chemotaxis protein methyltransferase (CheR) {ECO:0000313|EMBL:AAB90203.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archa
Chemotaxis protein methyltransferase (CheR)
S_scaffold_31_41
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(34976..35443)
DNA (468bp) protein (156aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000255|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000255|HAMAP-Rule:MF_01440};; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeogl
hypothetical protein
Probable chemoreceptor glutamine deamidase CheD
S_scaffold_31_42
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(35443..36051)
DNA (609bp) protein (203aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAB90201.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (s
Putative uncharacterized protein
S_scaffold_31_43
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(36044..38011)
DNA (1968bp) protein (656aa)
cheA; chemotaxis protein CheA
Chemotaxis histidine kinase (CheA) {ECO:0000313|EMBL:AAB90200.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus
Chemotaxis histidine kinase (CheA)
S_scaffold_31_44
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(38004..39050)
DNA (1047bp) protein (349aa)
Chemotaxis response regulator (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeo
Chemotaxis response regulator protein-glutamate methylesterase
S_scaffold_31_45
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(39052..39417)
DNA (366bp) protein (122aa)
Response regulator
Chemotaxis response regulator (CheY) {ECO:0000313|EMBL:AAB90207.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobu
Chemotaxis response regulator (CheY)
S_scaffold_31_46
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(39422..40228)
DNA (807bp) protein (269aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AIG97922.1}; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus D
Putative uncharacterized protein
S_scaffold_31_47
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(40231..40695)
DNA (465bp) protein (155aa)
Chemotaxis signal transduction protein
Purine-binding chemotaxis protein (CheW) {ECO:0000313|EMBL:AAB90206.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeog
Purine-binding chemotaxis protein (CheW)
S_scaffold_31_48
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(40736..42559)
DNA (1824bp) protein (608aa)
tlpC-1; methyl-accepting chemotaxis protein
PAS domain protein S-box {ECO:0000313|EMBL:AIG97913.1}; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus
Methyl-accepting chemotaxis protein (TlpC-1)
S_scaffold_31_49
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

42724..42885
DNA (162bp) protein (54aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK60848.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticall
Uncharacterized protein
S_scaffold_31_50
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

43054..43878
DNA (825bp) protein (275aa)
guaB-2; putative inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Putative inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:CAJ37719.1}; EC=1.1.1.205 {ECO:0000313|EMBL:CAJ37719.1};; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellal
Putative inosine-5\'-monophosphate dehydrogenase
S_scaffold_31_51
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


43880..46339
DNA (2460bp) protein (820aa)
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobact
DNA gyrase subunit A
S_scaffold_31_52
S_OP1_64_32, KB1, Bacteria

Not on your lists

46342..46623
DNA (282bp) protein (94aa)
Acylphosphatase Tax=S_OP1_64_32
acylphosphatase
Acylphosphatase
S_scaffold_31_53
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

46628..46930
DNA (303bp) protein (101aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX52673.1}; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Amm
Putative uncharacterized protein
S_scaffold_31_54
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

46927..47922
DNA (996bp) protein (332aa)
hypothetical protein; K06914 Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
Uncharacterized protein
S_scaffold_31_55
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47956..48375
DNA (420bp) protein (140aa)
Ferritin, Dps family protein; K03594 bacterioferritin Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
ferritin and Dps
Ferritin and Dps
S_scaffold_31_56
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

48573..50054
DNA (1482bp) protein (494aa)
Indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoredu
Indolepyruvate ferredoxin oxidoreductase
S_scaffold_31_57
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

50069..50890
DNA (822bp) protein (274aa)
Quinolinate phosphoribosyltransferase (decarboxylating) (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] {ECO:0000256|PIRNR:PIRNR006250}; EC=2.4.2.19 {ECO:0000256|PIRNR:PIRNR006250};; Quinolinate phosphoribosyltransferase [decarboxylating] {ECO:0000
Nicotinate-nucleotide pyrophosphorylase (Carboxylating)
S_scaffold_31_58
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(51032..53413)
DNA (2382bp) protein (794aa)
methyl-viologen-reducing hydrogenase, delta subunit
CoB--CoM heterodisulfide reductase subunit A {ECO:0000313|EMBL:ABK15346.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="
CoB--CoM heterodisulfide reductase subunit A
S_scaffold_31_59
Thermoanaerobacter siderophilus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53514..54245)
DNA (732bp) protein (244aa)
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EIV99820.1}; Flags: Precursor;; TaxID=880478 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.
Putative uncharacterized protein
S_scaffold_31_60
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(54187..54729)
DNA (543bp) protein (181aa)
hypothetical protein
Uncharacterized protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying items 31-60 of 62 in total

View Taxonomy