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S_scaffold_31

Alias: S_Methanogen_56_636_4

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Displaying items 1-30 of 62 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_31_1
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(3..191)
DNA (189bp) protein (63aa)
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGK60298.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfatica
Putative membrane protein
S_scaffold_31_2
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

804..1982
DNA (1179bp) protein (393aa)
putative flavoprotein rbh
Putative flavoprotein {ECO:0000313|EMBL:AGK61255.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallid
Putative flavoprotein
S_scaffold_31_3
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2352..2660
DNA (309bp) protein (103aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI73894.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium
Uncharacterized protein
S_scaffold_31_4
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2657..3883
DNA (1227bp) protein (409aa)
hypothetical protein
TIGR00300 family protein {ECO:0000313|EMBL:AFD01112.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii
TIGR00300 family protein
S_scaffold_31_5
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3880..4746)
DNA (867bp) protein (289aa)
putative transcriptional regulator, contains C-terminal CBS domains
Putative transcriptional regulator, contains C-terminal CBS domains {ECO:0000313|EMBL:AGB48483.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae;
Putative transcriptional regulator, contains C-terminal CBS domains
S_scaffold_31_6
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5199..7442)
DNA (2244bp) protein (748aa)
anaerobic ribonucleoside-triphosphate reductase
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:ABK15043.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" sourc
Anaerobic ribonucleoside-triphosphate reductase
S_scaffold_31_7
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7531..8166)
DNA (636bp) protein (212aa)
hexulose-6-phosphate isomerase (EC:5.-.-.-)
6-phospho-3-hexuloisomerase {ECO:0000313|EMBL:ABE52772.1}; EC=5.-.-.- {ECO:0000313|EMBL:ABE52772.1};; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinace
6-phospho-3-hexuloisomerase
S_scaffold_31_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8172..8636)
DNA (465bp) protein (155aa)
hypothetical protein
Putative uncharacterized protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
S_scaffold_31_9
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


8796..9275
DNA (480bp) protein (160aa)
rps13p; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella con
30S ribosomal protein S13
S_scaffold_31_10
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


9282..9818
DNA (537bp) protein (179aa)
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosa
30S ribosomal protein S4
S_scaffold_31_11
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


9830..10222
DNA (393bp) protein (131aa)
rps11p; 30S ribosomal protein S11P
30S ribosomal protein S11 {ECO:0000255|HAMAP-Rule:MF_01310}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta th
30S ribosomal protein S11
S_scaffold_31_12
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10232..11023
DNA (792bp) protein (264aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales
DNA-directed RNA polymerase, alpha subunit/40 kD subunit
DNA-directed RNA polymerase subunit D
S_scaffold_31_13
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11016..12314)
DNA (1299bp) protein (433aa)
Mur ligase middle domain protein
Mur ligase middle domain protein {ECO:0000313|EMBL:ADE36909.1}; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="Metha
Mur ligase middle domain protein
S_scaffold_31_14
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12314..12778)
DNA (465bp) protein (155aa)
cobalamin (vitamin B12) biosynthesis protein CbiX
Sirohydrochlorin cobaltochelatase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
S_scaffold_31_15
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12775..13950)
DNA (1176bp) protein (392aa)
nucleotidyltransferase
Nucleotidyl transferase {ECO:0000313|EMBL:AEH60610.1}; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="Methanosalsum zhil
Nucleotidyl transferase
S_scaffold_31_16
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13947..14747)
DNA (801bp) protein (267aa)
Inositol-1-monophosphatase {ECO:0000313|EMBL:AKB12188.1}; EC=3.1.3.25 {ECO:0000313|EMBL:AKB12188.1};; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinace
inositol monophosphatase/fructose-1,6-bisphosphatase family protein
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein
S_scaffold_31_17
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14747..15196)
DNA (450bp) protein (150aa)
Protein of unknown function, DUF583
Uncharacterized protein {ECO:0000313|EMBL:AGB50284.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanometh
Putative uncharacterized protein
S_scaffold_31_18
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15193..16044)
DNA (852bp) protein (284aa)
fba; fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:ABB14071.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ABB14071.1};; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales;
Fructose-1,6-bisphosphate aldolase, class II
S_scaffold_31_19
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

16545..17171
DNA (627bp) protein (209aa)
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=79929 species="A
Endonuclease III
S_scaffold_31_20

Not on your lists

17245..17613
DNA (369bp) protein (123aa)
paaD; phenylacetic acid degradation protein PaaD
Uncharacterized protein {ECO:0000313|EMBL:KKM20906.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Phenylacetic acid degradation protein PaaD
S_scaffold_31_21
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17614..17976)
DNA (363bp) protein (121aa)
prefoldin, beta subunit
Prefoldin subunit beta {ECO:0000255|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000255|HAMAP-Rule:MF_00307}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methano
Prefoldin subunit beta
S_scaffold_31_22
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18023..18307)
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB84821.1}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoid
Uncharacterized protein
S_scaffold_31_23
Methanobacterium sp. MB1, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18255..18770)
DNA (516bp) protein (172aa)
hypothetical protein
Probable Brix domain-containing ribosomal biogenesis protein {ECO:0000256|HAMAP-Rule:MF_00699}; TaxID=1379702 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae;
Putative exosome subunit/U3 small nucleolar ribonucleoprotein (SnoRNP) component, contains IMP4 domain
S_scaffold_31_24
unknown

Not on your lists

comp(18773..18907)
DNA (135bp) protein (45aa)
S_scaffold_31_25
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18904..19233)
DNA (330bp) protein (110aa)
rpl37ae; 50S ribosomal protein L37Ae
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinale
50S ribosomal protein L37Ae
S_scaffold_31_26
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19392..20909
DNA (1518bp) protein (506aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI73945.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium
Uncharacterized protein
S_scaffold_31_27
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20914..21300
DNA (387bp) protein (129aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
4Fe-4S ferredoxin, iron-sulfur binding domain protein {ECO:0000313|EMBL:ABK13823.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;"
4Fe-4S ferredoxin, iron-sulfur binding domain protein
S_scaffold_31_28
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21313..22005
DNA (693bp) protein (231aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HA
3-dehydroquinate dehydratase, type I
3-dehydroquinate dehydratase
S_scaffold_31_29
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22007..23050
DNA (1044bp) protein (348aa)
Radical SAM protein {ECO:0000313|EMBL:KGK99576.1}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides meth
radical SAM protein
Radical SAM domain protein
S_scaffold_31_30

Not on your lists

comp(23026..23709)
DNA (684bp) protein (228aa)
Orotidine 5' monophosphate decarboxylase {ECO:0000313|EMBL:AAU83898.1}; TaxID=285375 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos34H9.;"
Orotidine 5'-phosphate decarboxylase
Orotidine 5' monophosphate decarboxylase
Displaying items 1-30 of 62 in total

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