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S_Methanosarcinales_56_1174

s_Methanosarcinales_56_1244
In projects: s  |  Mp  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Methanosarcinales  →  Methanomicrobia  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: S_UNK

Properties

Avg. coverage: 1244.41 Longest contig: 117.98 Kbp Bin length: 1.34 Mbp GC content: 55.51 %
Contigs count: 59 Features count: 1464 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 30 / 55 MC: 1 BSCG 18 / 51 ASCG 36 / 38
Displaying items 1-50 of 59 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
S_scaffold_35 S_Methanogen_56_636_1
Order: Methanosarcinales (52.42%)
124 117985 bp 54.25 1346.74 92.40
S_scaffold_33 S_Methanogen_56_636_5
Order: Methanosarcinales (50.72%)
69 52874 bp 53.39 1336.79 92.59
S_scaffold_31 S_Methanogen_56_636_4
Order: Methanosarcinales (50%)
62 55836 bp 53.90 1311.28 92.68
S_scaffold_20 S_Methanogen_56_636_2
Order: Methanosarcinales (63.33%)
60 69846 bp 54.51 1314.56 92.77
S_scaffold_29 S_Methanogen_56_636_3
Phylum: Euryarchaeota (82.46%)
57 56110 bp 54.48 1303.31 93.70
S_scaffold_53 S_Methanogen_56_636_8
Class: Methanomicrobia (50.94%)
53 42448 bp 54.95 1233.47 87.38
S_scaffold_55 S_Methanogen_56_636_9
Class: Methanomicrobia (54.9%)
51 42033 bp 55.13 1205.42 94.38
S_scaffold_48 S_Methanogen_56_636_6
Order: Methanosarcinales (58.33%)
48 46996 bp 55.82 1242.74 92.08
S_scaffold_51 S_Methanogen_56_636_7
Order: Methanosarcinales (52.08%)
48 42731 bp 55.18 1227.72 90.90
S_scaffold_66 S_Methanogen_56_636_11
Domain: Archaea (55.32%)
47 37570 bp 50.77 1430.34 91.17
S_scaffold_73 S_Methanogen_56_636_12
Class: Methanomicrobia (60%)
45 35404 bp 55.15 1233.28 90.75
S_scaffold_75 S_Methanogen_56_636_13
Class: Methanomicrobia (52.38%)
42 34303 bp 55.39 1280.22 77.64
S_scaffold_65 S_Methanogen_56_636_10
Order: Methanosarcinales (72.97%)
37 37912 bp 60.05 1176.01 94.56
S_scaffold_135 S_Methanogen_56_636_14
Order: Methanosarcinales (62.16%)
37 33011 bp 58.76 1211.31 94.03
S_scaffold_92 S_Methanogen_56_636_17
Order: Methanosarcinales (70.59%)
34 29507 bp 60.41 1197.90 93.51
S_scaffold_88 S_Methanogen_56_636_15
Class: Methanomicrobia (63.64%)
33 29936 bp 57.63 1174.75 90.94
S_scaffold_168 S_Methanogen_56_636_25
Order: Methanosarcinales (51.61%)
31 22059 bp 54.29 1204.79 89.69
S_scaffold_99 S_Methanogen_56_636_19
Phylum: Euryarchaeota (66.67%)
30 28120 bp 56.20 1341.75 84.51
S_scaffold_274 S_Methanogen_56_636_18
Order: Methanosarcinales (56.67%)
30 29121 bp 58.65 1191.24 91.14
S_scaffold_89 S_Methanogen_56_636_16
Order: Methanosarcinales (77.78%)
27 29904 bp 57.02 1225.52 94.49
S_scaffold_160 S_Methanogen_56_636_26
Order: Methanosarcinales (74.07%)
27 21593 bp 56.36 1247.72 93.99
S_scaffold_125 S_Methanogen_56_636_22
Order: Methanosarcinales (65.38%)
26 23832 bp 56.01 1253.22 95.49
S_scaffold_170 S_Methanogen_56_636_27
Order: Methanosarcinales (53.85%)
26 20905 bp 55.72 1237.46 91.70
S_scaffold_217 S_Methanogen_56_636_24
Order: Methanosarcinales (53.85%)
26 22881 bp 57.21 1225.72 93.05
S_scaffold_123 S_Methanogen_56_636_21
Order: Methanosarcinales (60%)
25 24169 bp 56.60 1223.31 92.51
S_scaffold_132 S_Methanogen_56_636_23
Order: Methanosarcinales (50%)
24 23364 bp 55.02 1297.24 91.85
S_scaffold_171 S_Methanogen_56_636_20
Order: Methanosarcinales (59.09%)
22 25074 bp 56.61 1017.30 95.48
S_scaffold_401 S_Methanogen_56_636_30
Phylum: Euryarchaeota (52.63%)
19 17535 bp 52.31 1362.10 83.80
S_scaffold_182 S_Methanogen_56_636_28
Order: Methanosarcinales (57.89%)
19 19965 bp 56.20 1242.22 88.57
S_scaffold_235 S_Methanogen_56_636_31
Phylum: Euryarchaeota (68.42%)
19 17316 bp 53.40 1094.32 83.82
S_scaffold_257 S_Methanogen_56_636_33
Class: Methanomicrobia (58.82%)
17 16347 bp 55.63 1242.86 95.36
S_scaffold_230 S_Methanogen_56_636_29
Order: Methanosarcinales (81.25%)
16 17682 bp 58.36 1192.92 94.71
S_scaffold_302 S_Methanogen_56_636_35
Order: Methanosarcinales (80%)
15 14771 bp 56.20 1274.93 93.20
S_scaffold_515 S_Methanogen_56_636_41
Order: Methanosarcinales (50%)
14 10137 bp 57.67 1246.48 89.41
S_scaffold_288 S_Methanogen_56_636_34
Class: Methanomicrobia (50%)
14 15153 bp 51.40 1311.31 95.64
S_scaffold_639 S_Methanogen_56_636_36
Order: Archaeoglobales (61.54%)
13 12132 bp 50.40 1290.58 79.97
S_scaffold_252 S_Methanogen_56_636_32
Order: Methanosarcinales (69.23%)
13 16456 bp 57.92 1204.65 94.85
S_scaffold_634 S_Methanogen_56_636_47
Order: Methanosarcinales (66.67%)
12 8968 bp 54.84 1233.05 79.72
S_scaffold_514 S_Methanogen_56_636_40
Order: Archaeoglobales (50%)
12 10142 bp 51.70 1323.73 90.57
S_scaffold_539 S_Methanogen_56_636_45
Order: Methanosarcinales (83.33%)
12 9814 bp 57.02 1217.41 96.14
S_scaffold_458 S_Methanogen_56_636_37
Class: Methanomicrobia (63.64%)
11 11499 bp 57.15 1148.32 92.51
S_scaffold_475 S_Methanogen_56_636_38
Order: Methanosarcinales (54.55%)
11 10916 bp 58.48 1171.89 96.71
S_scaffold_542 S_Methanogen_56_636_39
Phylum: Euryarchaeota (54.55%)
11 10286 bp 56.45 1231.48 89.69
S_scaffold_519 S_Methanogen_56_636_42
Species: Pyrococcus yayanosii (50%)
10 10093 bp 54.29 15.95 97.46
S_scaffold_532 S_Methanogen_56_636_44
Order: Methanosarcinales (60%)
10 9923 bp 56.35 1259.63 91.27
S_scaffold_552 S_Methanogen_56_636_46
Order: Methanosarcinales (80%)
10 9713 bp 56.67 1205.61 84.10
S_scaffold_659 S_Methanogen_56_636_48
Order: Methanosarcinales (66.67%)
9 8711 bp 56.10 1274.80 95.22
S_scaffold_966 S_Methanogen_56_636_49
Order: Methanosarcinales (88.89%)
9 6400 bp 56.77 1218.21 95.91
S_scaffold_527 S_Methanogen_56_636_43
Order: Methanosarcinales (77.78%)
9 9955 bp 55.03 1214.43 92.61
S_scaffold_1824 S_Methanogen_56_636_52
Order: Methanosarcinales (50%)
6 3973 bp 57.51 1132.83 97.56
Displaying items 1-50 of 59 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.