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S_scaffold_235

Alias: S_Methanogen_56_636_31

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_235_1
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(2..349)
DNA (348bp) protein (116aa)
putative ATPase of the PP-loop superfamily implicated in cell cycle control
Uncharacterized protein {ECO:0000313|EMBL:AAB89924.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (s
Putative uncharacterized protein
S_scaffold_235_2
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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900..1121
DNA (222bp) protein (74aa)
SirA-like domain-containing protein
SirA-like domain-containing protein {ECO:0000313|EMBL:AEG17819.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="M
SirA-like domain-containing protein
S_scaffold_235_3
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1210..2382
DNA (1173bp) protein (391aa)
cysteine desulfurase family protein
Cysteine desulfurase family protein {ECO:0000313|EMBL:AGB49405.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source=
Cysteine desulfurase family protein
S_scaffold_235_4
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2394..3029
DNA (636bp) protein (212aa)
Nitrogen fixation protein NifU {ECO:0000313|EMBL:KKH48456.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosa
NifU family protein
NifU family protein
S_scaffold_235_5
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(3054..4160)
DNA (1107bp) protein (369aa)
ABC-type transport system involved in Fe-S cluster assembly, permease component {ECO:0000313|EMBL:AKG91899.1}; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeogloba
Iron-sulfur cluster assembly protein SufB
ABC-type transport system involved in Fe-S cluster assembly, permease component
S_scaffold_235_6
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(4142..4924)
DNA (783bp) protein (261aa)
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:AEA47740.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus ven
ABC transporter related protein
S_scaffold_235_7

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comp(5237..5404)
DNA (168bp) protein (56aa)
Marine sediment metagenome DNA, contig: S01H1_S07664 {ECO:0000313|EMBL:GAG13700.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
YHS domain-containing protein
S_scaffold_235_8
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5424..6365)
DNA (942bp) protein (314aa)
Probable deoxyhypusine synthase {ECO:0000256|HAMAP-Rule:MF_00153}; Short=DHS {ECO:0000256|HAMAP-Rule:MF_00153};; EC=2.5.1.46 {ECO:0000256|HAMAP-Rule:MF_00153};; TaxID=867904 species="Archaea; Euryarch
deoxyhypusine synthase
Probable deoxyhypusine synthase
S_scaffold_235_9
unknown

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comp(6401..6565)
DNA (165bp) protein (55aa)
S_scaffold_235_10
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(6838..7554)
DNA (717bp) protein (239aa)
mtmB13; monomethylamine:corrinoid methyltransferase MtmB (EC:2.1.1.248) rbh
MtmB13 protein {ECO:0000313|EMBL:AIZ56465.1}; EC=2.1.1.248 {ECO:0000313|EMBL:AIZ56465.1};; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccac
Monomethylamine:corrinoid methyltransferase
S_scaffold_235_11
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(7612..8217)
DNA (606bp) protein (202aa)
mtmB13; monomethylamine:corrinoid methyltransferase MtmB (EC:2.1.1.248)
Monomethylamine:corrinoid methyltransferase {ECO:0000313|EMBL:AGY50175.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomass
Monomethylamine methyltransferase MtmB
S_scaffold_235_12
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(8235..8876)
DNA (642bp) protein (214aa)
putative cobalamin binding protein
Monomethylamine methyltransferase corrinoid protein {ECO:0000313|EMBL:AGN26253.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Met
Putative cobalamin binding protein
S_scaffold_235_13
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(8953..10581)
DNA (1629bp) protein (543aa)
putative metal-binding protein
Putative metal-binding protein {ECO:0000313|EMBL:AGN26248.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;"
Putative metal-binding protein
S_scaffold_235_14
Persephonella marina, Persephonella, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

11463..11909
DNA (447bp) protein (149aa)
hypothetical protein
Cbs domain containing protein {ECO:0000313|EMBL:ACO04251.1}; TaxID=123214 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Persephonella.;" source="Persephonella marina (strain DSM 1435
Cbs domain containing protein
S_scaffold_235_15
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12019..13581)
DNA (1563bp) protein (521aa)
Similar to phytoene dehydrogenase (Phytoene desaturase) {ECO:0000313|EMBL:CAJ74370.1}; EC=1.14.99.- {ECO:0000313|EMBL:CAJ74370.1};; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Cand
Phytoene dehydrogenase-related protein
Similar to phytoene dehydrogenase (Phytoene desaturase)
S_scaffold_235_16
Bacillus cellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13647..14789)
DNA (1143bp) protein (381aa)
arsenic resistance protein
Arsenical-resistance protein {ECO:0000313|EMBL:ADU28560.1}; TaxID=649639 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus cellulosilyticus (strain ATCC 218
Arsenical-resistance protein
S_scaffold_235_17
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14868..16295)
DNA (1428bp) protein (476aa)
Dimethylamine permease {ECO:0000313|EMBL:AKB25086.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp
mtbP; dimethylamine permease
Dimethylamine permease
S_scaffold_235_18
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16496..16810)
DNA (315bp) protein (105aa)
Dimethylamine methyltransferase MtbB2; Short=DMA methyltransferase 2;; Short=DMAMT 2;; EC=2.1.1.249;; Dimethylamine--corrinoid protein methyltransferase 2; TaxID=188937 species="Archaea; Euryarchaeota
mtbB; dimethylamine methyltransferase
Dimethylamine methyltransferase MtbB1
S_scaffold_235_19
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16835..17314)
DNA (480bp) protein (160aa)
Dimethylamine:corrinoid methyltransferase
Dimethylamine methyltransferase MtbB3
Tax=BJP_08E140C01_Clostridiales_46_19
Displaying 19 items

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