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S_scaffold_29

Alias: S_Methanogen_56_636_3

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Displaying items 1-30 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_29_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(2..118)
DNA (117bp) protein (39aa)
mch; N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase (EC:3.5.4.27); K01499 methenyltetrahydromethanopterin cyclohydrolase [EC:3.5.4.27] Tax=RBG_16_Euryarchaeota_41_19_curated
Methenyltetrahydromethanopterin cyclohydrolase
S_scaffold_29_2
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(164..613)
DNA (450bp) protein (150aa)
alkylhydroperoxidase
Alkylhydroperoxidase like protein, AhpD family {ECO:0000313|EMBL:ABX01153.1}; TaxID=444158 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Me
Alkylhydroperoxidase like protein, AhpD family
S_scaffold_29_3
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(652..1413)
DNA (762bp) protein (254aa)
cooC; CODH nickel-insertion accessory protein
CODH nickel-insertion accessory protein {ECO:0000313|EMBL:AAM05370.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="M
CODH nickel-insertion accessory protein
S_scaffold_29_4
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1545..2237
DNA (693bp) protein (231aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI74575.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium
Uncharacterized protein
S_scaffold_29_5
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2269..3300)
DNA (1032bp) protein (344aa)
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|RuleBase:RU004501}; EC=1.2.1.11 {ECO:0000256|RuleBase:RU004501};; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Me
Aspartate-semialdehyde dehydrogenase
S_scaffold_29_6
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3419..5323
DNA (1905bp) protein (635aa)
Threonine--tRNA ligase {ECO:0000313|EMBL:KKG11928.1}; EC=6.1.1.3 {ECO:0000313|EMBL:KKG11928.1};; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae;
threonyl-tRNA synthetase
Threonine--tRNA ligase
S_scaffold_29_7
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5372..6292)
DNA (921bp) protein (307aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV23773.1}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psych
Uncharacterized protein
S_scaffold_29_8
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(6325..7707)
DNA (1383bp) protein (461aa)
methyltransferase
Methyltransferase {ECO:0000313|EMBL:AEC52607.1}; TaxID=342949 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. (strain NA2).;"
Methyltransferase
S_scaffold_29_9
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(7673..9106)
DNA (1434bp) protein (478aa)
radical SAM additional 4Fe4S-binding domain protein rbh
Radical SAM additional 4Fe4S-binding domain protein {ECO:0000313|EMBL:AGK60686.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" sourc
Radical SAM additional 4Fe4S-binding domain protein
S_scaffold_29_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9235..9849
DNA (615bp) protein (205aa)
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase {ECO:0000313|EMBL:KCZ70369.1}; EC=2.1.2.2 {ECO:0000313|EMBL:KCZ70369.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Me
phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent
Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent
S_scaffold_29_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10017..11204
DNA (1188bp) protein (396aa)
bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase
Bifunctional enzyme Fae/Hps {ECO:0000256|HAMAP-Rule:MF_01268}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanopere
Bifunctional enzyme fae/hps
S_scaffold_29_12
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

Not on your lists

comp(11251..11481)
DNA (231bp) protein (77aa)
redox protein, regulator of disulfide bond formation
Predicted redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:AAM01474.1}; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;
Predicted redox protein, regulator of disulfide bond formation
S_scaffold_29_13
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11497..12681)
DNA (1185bp) protein (395aa)
Coenzyme F420 hydrogenase subunit beta
Coenzyme F420 hydrogenase subunit beta {ECO:0000313|EMBL:AKB45668.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="M
Coenzyme F420 hydrogenase, beta subunit
S_scaffold_29_14

Not on your lists

comp(12668..13846)
DNA (1179bp) protein (393aa)
Marine sediment metagenome DNA, contig: S12H4_C03329 {ECO:0000313|EMBL:GAI65901.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
S_scaffold_29_15

Not on your lists

comp(13843..14298)
DNA (456bp) protein (152aa)
methyl-viologen-reducing hydrogenase delta subunit
Uncharacterized protein {ECO:0000313|EMBL:KKO11038.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Methyl-viologen-reducing hydrogenase subunit D
S_scaffold_29_16
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

Not on your lists

comp(14295..16292)
DNA (1998bp) protein (666aa)
CoB--CoM heterodisulfide reductase iron-sulfur subunit A 1; EC=1.8.98.1;; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyr
HdrA_1; heterodisulfide reductase, subunit A
CoB--CoM heterodisulfide reductase iron-sulfur subunit A 1
S_scaffold_29_17
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(16289..17170)
DNA (882bp) protein (294aa)
CoB/CoM heterodisulfide reductase, subunit B {ECO:0000313|EMBL:AEF95979.1}; EC=1.8.98.1 {ECO:0000313|EMBL:AEF95979.1};; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Met
CoB/CoM heterodisulfide reductase subunit B
CoB/CoM heterodisulfide reductase, subunit B
S_scaffold_29_18
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(17167..17688)
DNA (522bp) protein (174aa)
CoB/CoM heterodisulfide reductase subunit C (EC:1.8.98.1)
CoB/CoM heterodisulfide reductase, subunit C {ECO:0000313|EMBL:ACX72302.1}; EC=1.8.98.1 {ECO:0000313|EMBL:ACX72302.1};; TaxID=579137 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Met
CoB--CoM heterodisulfide reductase iron-sulfur subunit C
S_scaffold_29_19
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17705..18070)
DNA (366bp) protein (122aa)
peroxiredoxin-related protein
Peroxiredoxin-related protein {ECO:0000313|EMBL:ADL57618.1}; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Metha
Peroxiredoxin-related protein
S_scaffold_29_20

Not on your lists

comp(18080..18439)
DNA (360bp) protein (120aa)
Marine sediment metagenome DNA, contig: S01H4_C05217 {ECO:0000313|EMBL:GAG62757.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
DsrE family protein
DsrE family protein
S_scaffold_29_21

Not on your lists

comp(18611..19510)
DNA (900bp) protein (300aa)
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39504.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Putative uncharacterized protein
S_scaffold_29_22
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19612..21102
DNA (1491bp) protein (497aa)
lysK; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=349307 species="Archaea; Euryarchae
Lysine--tRNA ligase
S_scaffold_29_23
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21099..21974
DNA (876bp) protein (292aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB85034.1}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoid
hypothetical protein
Uncharacterized protein
S_scaffold_29_24
unknown

Not on your lists

comp(22183..22500)
DNA (318bp) protein (106aa)
S_scaffold_29_25
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(22565..24256)
DNA (1692bp) protein (564aa)
Methyltransferase corrinoid activation protein rbh
Methyltransferase corrinoid activation protein {ECO:0000313|EMBL:AGN25961.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanom
Methyltransferase corrinoid activation protein
S_scaffold_29_26
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24269..25345)
DNA (1077bp) protein (359aa)
Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family {ECO:0000313|EMBL:AKB17408.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methano
Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
CobW protein
S_scaffold_29_27
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25394..27175)
DNA (1782bp) protein (594aa)
hydantoinase
Hydantoinase {ECO:0000313|EMBL:AFV23901.1}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psychrophilus R1
Hydantoinase
S_scaffold_29_28
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

27414..28181
DNA (768bp) protein (256aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI61248.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola
Uncharacterized protein
S_scaffold_29_29
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

28394..29935
DNA (1542bp) protein (514aa)
adenine-specific DNA methyltransferase (EC:2.1.1.72)
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:AEA47900.1}; EC=2.1.1.72 {ECO:0000313|EMBL:AEA47900.1};; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglo
Site-specific DNA-methyltransferase (Adenine-specific)
S_scaffold_29_30
unknown

Not on your lists

29941..30276
DNA (336bp) protein (112aa)
Displaying items 1-30 of 57 in total

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