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S_scaffold_73

Alias: S_Methanogen_56_636_12

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_73_1
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2..1012)
DNA (1011bp) protein (337aa)
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methano
50S ribosomal protein L10P
Acidic ribosomal protein P0 homolog
S_scaffold_73_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1013..1648)
DNA (636bp) protein (212aa)
LSU ribosomal protein L10Ae (L1p)
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00010815}; TaxID=1434106 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methan
50S ribosomal protein L1
S_scaffold_73_3
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1760..2416)
DNA (657bp) protein (219aa)
histone deacetylase superfamily
Histone deacetylase superfamily
Tax=BJP_IG2069_Syntrophobacterales_47_18
S_scaffold_73_4
unknown

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comp(2807..3160)
DNA (354bp) protein (118aa)
S_scaffold_73_5
Thermobaculum terrenum, Thermobaculum, Bacteria

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3207..3710
DNA (504bp) protein (168aa)
dUTPase
DUTPase {ECO:0000313|EMBL:ACZ41007.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
DUTPase
S_scaffold_73_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3816..5120
DNA (1305bp) protein (435aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:KCZ70566.1}; EC=2.7.1.49 {ECO:0000313|EMBL:KCZ70566.1};; EC=2.7.4.7 {ECO:0000313|EMBL:KCZ70566.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Meth
Phosphomethylpyrimidine kinase (EC:2.7.4.7 2.5.1.3)
Phosphomethylpyrimidine kinase
S_scaffold_73_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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5666..6430
DNA (765bp) protein (255aa)
molybdenum ABC transporter periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein Tax=RBG_16_RIF_WS3X_71_46_curated
molybdenum ABC transporter, periplasmic molybdate-binding protein
Molybdenum ABC transporter, periplasmic molybdate-binding protein
S_scaffold_73_8
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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6427..7218
DNA (792bp) protein (264aa)
modB; ABC-type molybdenum import system, permease component
ABC-type molybdenum import system, permease component {ECO:0000313|EMBL:CAJ36861.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" s
ABC-type molybdenum import system, permease component
S_scaffold_73_9
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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7211..7897
DNA (687bp) protein (229aa)
Fe(3+)-transporting ATPase
Fe(3+)-transporting ATPase {ECO:0000313|EMBL:EGJ50124.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfo
Fe(3+)-transporting ATPase
S_scaffold_73_10
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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7894..8796
DNA (903bp) protein (301aa)
Probable cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Ru
molybdenum cofactor biosynthesis protein A
Probable cyclic pyranopterin monophosphate synthase
S_scaffold_73_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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8801..9046
DNA (246bp) protein (82aa)
molybdopterin converting factor subunit 1; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=CSP1_6_Rokubacteria
molybdenum cofactor biosynthesis protein D/E
Molybdenum cofactor biosynthesis protein D/E
S_scaffold_73_12
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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9051..9461
DNA (411bp) protein (137aa)
molybdopterin biosynthesis protein MoaE
Molybdopterin biosynthesis MoaE protein {ECO:0000313|EMBL:AEF96259.1}; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Meth
Molybdopterin biosynthesis MoaE protein
S_scaffold_73_13
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9462..9929
DNA (468bp) protein (156aa)
Molybdenum cofactor biosynthesis protein C
Probable cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1110509 spe
Probable cyclic pyranopterin monophosphate synthase accessory protein
S_scaffold_73_14
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9902..11059
DNA (1158bp) protein (386aa)
moeA-4; molybdopterin biosynthesis protein A
Molybdopterin biosynthesis protein A {ECO:0000313|EMBL:CAJ36878.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocel
Molybdopterin biosynthesis protein A
S_scaffold_73_15
Thermogladius cellulolyticus, Thermogladius, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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11382..11696
DNA (315bp) protein (105aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK51109.1}; TaxID=1184251 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Thermogladius.;" source="Thermogladius cellul
Uncharacterized protein
S_scaffold_73_16
Pyrococcus sp. GI-H, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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11698..13002
DNA (1305bp) protein (435aa)
PspGI methylase {ECO:0000313|EMBL:AAC67523.1}; TaxID=83521 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. GI-H.;"
DNA methylase N-4/N-6 domain-containing protein
PspGI methylase
S_scaffold_73_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(12988..13875)
DNA (888bp) protein (296aa)
Putative uncharacterized protein {ECO:0000313|EMBL:EGL76860.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula
glycosyl hydrolase
Putative uncharacterized protein
S_scaffold_73_18
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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14416..15090
DNA (675bp) protein (225aa)
hypothetical protein
Putative uncharacterized protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
S_scaffold_73_19
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15077..16351
DNA (1275bp) protein (425aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiam
thiamine biosynthesis protein ThiC
Phosphomethylpyrimidine synthase
S_scaffold_73_20
unknown

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16530..16676
DNA (147bp) protein (49aa)
S_scaffold_73_21
CG_Nitrosp_02, Nitrospirae, Bacteria

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16704..18062
DNA (1359bp) protein (453aa)
radical SAM additional 4Fe4S-binding domain protein Tax=CG_Nitrosp_02
radical SAM additional 4Fe4S-binding protein domain protein
Uncharacterized protein AF_2204
S_scaffold_73_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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18163..18792
DNA (630bp) protein (210aa)
Phosphate transport regulator related to PhoU {ECO:0000313|EMBL:KCZ71361.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidat
hypothetical protein
Putative uncharacterized protein
S_scaffold_73_23
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18802..19986
DNA (1185bp) protein (395aa)
phosphate transporter
Phosphate transporter {ECO:0000313|EMBL:ABD40771.1}; TaxID=323259 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillu
Phosphate transporter
S_scaffold_73_24
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(19989..20501)
DNA (513bp) protein (171aa)
Molybdenum cofactor biosynthesis protein MoaB
Molybdenum cofactor biosynthesis protein MoaB {ECO:0000313|EMBL:AKB76332.1}; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" so
Molybdenum cofactor synthesis domain protein
S_scaffold_73_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20511..22667)
DNA (2157bp) protein (719aa)
ATP-dependent DNA helicase Hel308 {ECO:0000256|HAMAP-Rule:MF_00442}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00442};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
helicase
Putative ski2-type helicase
S_scaffold_73_26
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22730..23038
DNA (309bp) protein (103aa)
hypothetical protein
UPF0235 protein MCP_0111 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella palud
UPF0235 protein MCP_0111
S_scaffold_73_27
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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23041..23445
DNA (405bp) protein (135aa)
hypothetical protein
UPF0292 protein MSMAP_0482 {ECO:0000256|HAMAP-Rule:MF_01095}; TaxID=1434115 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosa
UPF0292 protein MM_0821
S_scaffold_73_28
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

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23479..23643
DNA (165bp) protein (55aa)
rubredoxin-type Fe(Cys)4 protein
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
Rubredoxin
S_scaffold_73_29
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23646..24506)
DNA (861bp) protein (287aa)
GHMP kinase ATP-binding protein
GHMP kinase ATP-binding protein, putative {ECO:0000313|EMBL:AEB69704.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Met
GHMP kinase ATP-binding protein, putative
S_scaffold_73_30
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24469..25851)
DNA (1383bp) protein (461aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=867904 species="Archaea; Euryarchaeota; Methanom
dihydroorotase, multifunctional complex type
Dihydroorotase
Displaying items 1-30 of 45 in total

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