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S_scaffold_257

Alias: S_Methanogen_56_636_33

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_257_1
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..599)
DNA (597bp) protein (199aa)
hypothetical protein Tax=RBG_16_Chloroflexi_57_9_curated
Ig domain protein group 2 domain protein
S_scaffold_257_2
unknown

Not on your lists

867..2588
DNA (1722bp) protein (574aa)
S_scaffold_257_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2585..3472
DNA (888bp) protein (296aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72805.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
hypothetical protein
Uncharacterized protein
S_scaffold_257_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3485..4462
DNA (978bp) protein (326aa)
MoxR-like ATPase {ECO:0000313|EMBL:KCZ72806.1}; EC=3.6.3.- {ECO:0000313|EMBL:KCZ72806.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedena
MoxR-like ATPase (EC:3.6.3.-)
MoxR-like ATPase
S_scaffold_257_5
GWB2_Elusimicrobia_63_16_curated, Elusimicrobia, Bacteria

Not on your lists

4453..5862
DNA (1410bp) protein (470aa)
hypothetical protein
hypothetical protein Tax=GWB2_Elusimicrobia_63_16_curated
Uncharacterized protein
S_scaffold_257_6
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5939..6832
DNA (894bp) protein (298aa)
ADP-ribosylglycohydrolase YegU {ECO:0000313|EMBL:CEL23527.1}; EC=3.2.-.- {ECO:0000313|EMBL:CEL23527.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelos
ADP-ribosylation/crystallin J1
ADP-ribosylglycohydrolase
S_scaffold_257_7
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6818..7705)
DNA (888bp) protein (296aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487};; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcin
malate dehydrogenase, NAD-dependent
Malate dehydrogenase
S_scaffold_257_8
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7816..9147
DNA (1332bp) protein (444aa)
Uncharacterized protein {ECO:0000313|EMBL:KKH47190.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
hypothetical protein
Conserved protein
S_scaffold_257_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9123..10004)
DNA (882bp) protein (294aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72808.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
hypothetical protein
Uncharacterized protein
S_scaffold_257_10
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(10053..10715)
DNA (663bp) protein (221aa)
nitrite reductase (NAD(P)H) (EC:1.7.1.4) rbh
Nitrite reductase (NAD(P)H) {ECO:0000313|EMBL:AEA46108.1}; EC=1.7.1.4 {ECO:0000313|EMBL:AEA46108.1};; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Arc
Nitrite reductase (NAD(P)H)
S_scaffold_257_11
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10776..11579
DNA (804bp) protein (268aa)
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAI62825.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella
Putative transcriptional regulator
S_scaffold_257_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(11576..13147)
DNA (1572bp) protein (524aa)
isopropylmalate/citramalate/homocitrate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RBG_16_Euryarchaeota_41_19_curated
2-isopropylmalate synthase (EC:2.3.3.13)
Probable 2-isopropylmalate synthase
S_scaffold_257_13
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13193..13984)
DNA (792bp) protein (264aa)
helix-turn-helix domain-containing protein
Helix-turn-helix, type 11 domain protein {ECO:0000313|EMBL:AET65584.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Met
Helix-turn-helix, type 11 domain protein
S_scaffold_257_14
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13992..14510)
DNA (519bp) protein (173aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI60139.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola
Uncharacterized protein
S_scaffold_257_15
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14582..15499
DNA (918bp) protein (306aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
ribonuclease Z
Ribonuclease Z
S_scaffold_257_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

15499..15861
DNA (363bp) protein (121aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
S_scaffold_257_17
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15981..16346)
DNA (366bp) protein (122aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 17 items

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