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S_scaffold_132

Alias: S_Methanogen_56_636_23

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_132_1
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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1..3147
DNA (3147bp) protein (1049aa)
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:AEA46045.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglob
Transcriptional regulator, XRE family
S_scaffold_132_2
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3163..3741
DNA (579bp) protein (193aa)
Mn2+-dependent serine/threonine protein kinase
Mn2+-dependent serine/threonine protein kinase {ECO:0000313|EMBL:AET63752.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" sourc
Mn2+-dependent serine/threonine protein kinase
S_scaffold_132_3
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3743..4753
DNA (1011bp) protein (337aa)
RNA cap guanine-N2 methyltransferase
RNA cap guanine-N2 methyltransferase {ECO:0000313|EMBL:ADE36866.1}; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="M
RNA cap guanine-N2 methyltransferase
S_scaffold_132_4
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(4774..5583)
DNA (810bp) protein (270aa)
Serine/threonine protein phosphatase catalytic subunit (EC:3.1.3.16)
Uncharacterized protein {ECO:0000313|EMBL:AGT34917.1}; TaxID=1365176 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1910b.;"
Bis(5'nucleosyl)-tetraphosphatase, ApaH
S_scaffold_132_5
unknown

Not on your lists

comp(5600..5929)
DNA (330bp) protein (110aa)
S_scaffold_132_6
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(6197..6673)
DNA (477bp) protein (159aa)
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RBG_13_Chloroflexi_54_8_curated
hspC; small heat shock protein (class I)
Small heat shock protein
S_scaffold_132_7
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(6753..8474)
DNA (1722bp) protein (574aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1094980 species="Archaea; Eury
argS; arginyl-tRNA synthetase
Arginine--tRNA ligase
S_scaffold_132_8
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8618..9568)
DNA (951bp) protein (317aa)
nucleoside recognition domain-containing protein
Nucleoside recognition domain protein {ECO:0000313|EMBL:ADI73669.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Me
Nucleoside recognition domain protein
S_scaffold_132_9
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9620..10093)
DNA (474bp) protein (158aa)
Phosphodiesterase {ECO:0000313|EMBL:KKG26116.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H
hypothetical protein
Uncharacterized protein
S_scaffold_132_10
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10090..11247)
DNA (1158bp) protein (386aa)
class I and II aminotransferase (EC:2.6.1.1)
Aminotransferase class I and II {ECO:0000313|EMBL:AEH60752.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AEH60752.1};; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarci
Aminotransferase class I and II
S_scaffold_132_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11248..11670)
DNA (423bp) protein (141aa)
ribH; riboflavin synthase, beta subunit (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
6,7-dimethyl-8-ribityllumazine synthase
S_scaffold_132_12
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11710..13299)
DNA (1590bp) protein (530aa)
ABC1 family protein {ECO:0000313|EMBL:AKB24264.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. M
unusual protein kinase
Unusual protein kinase
S_scaffold_132_13
unknown

Not on your lists

comp(13309..13473)
DNA (165bp) protein (55aa)
S_scaffold_132_14
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13470..14363)
DNA (894bp) protein (298aa)
hypothetical protein
Uncharacterized protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
S_scaffold_132_15
unknown

Not on your lists

14448..14591
DNA (144bp) protein (48aa)
S_scaffold_132_16
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14631..15566
DNA (936bp) protein (312aa)
Probable porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:00
porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase
S_scaffold_132_17
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(15830..17146)
DNA (1317bp) protein (439aa)
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (EC:2.7.7.13)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:ADB58082.1}; EC=2.7.7.13 {ECO:0000313|EMBL:ADB58082.1};; TaxID=572546 species="Archaea; Euryarchaeota; Archaeogl
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
S_scaffold_132_18
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

17227..18261
DNA (1035bp) protein (345aa)
glycosidase-like protein rbh
Glycosidase related protein {ECO:0000313|EMBL:AEA46317.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus venefic
Glycosidase related protein
S_scaffold_132_19
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(18245..19294)
DNA (1050bp) protein (350aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB58642.1}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus profundus (
Putative uncharacterized protein
S_scaffold_132_20
unknown

Not on your lists

comp(19409..19945)
DNA (537bp) protein (179aa)
S_scaffold_132_21
unknown

Not on your lists

comp(19942..20343)
DNA (402bp) protein (134aa)
S_scaffold_132_22
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20391..21494)
DNA (1104bp) protein (368aa)
FO synthase subunit 2 {ECO:0000256|HAMAP-Rule:MF_01612}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01612};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2 {ECO:0000256|HAMAP-Rule:MF_01612}
radical SAM domain protein, CofH subfamily
FO synthase subunit 2
S_scaffold_132_23
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21681..22706
DNA (1026bp) protein (342aa)
Methionine synthase vitamin-B12 independent
Methionine synthase vitamin-B12 independent {ECO:0000313|EMBL:AEH59893.1}; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source
Methionine synthase vitamin-B12 independent
S_scaffold_132_24
unknown

Not on your lists

23188..23364
DNA (177bp) protein (59aa)
Displaying 24 items

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