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S_scaffold_274

Alias: S_Methanogen_56_636_18

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_274_1

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172..1593
DNA (1422bp) protein (474aa)
Cell surface protein {ECO:0000313|EMBL:AAU83584.1}; TaxID=285369 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos31B6.;"
copper-binding protein
Cell surface protein
S_scaffold_274_2
unknown

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1590..1757
DNA (168bp) protein (56aa)
S_scaffold_274_3
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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1779..3971
DNA (2193bp) protein (731aa)
alpha,alpha-trehalose-phosphate synthase (UDP-forming)/trehalose-phosphatase (EC:2.4.1.15)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming)/trehalose-phosphatase {ECO:0000313|EMBL:CCJ36369.1}; EC=2.4.1.15 {ECO:0000313|EMBL:CCJ36369.1};; TaxID=1201294 species="Archaea; Euryarchaeota; M
Alpha,alpha-trehalose-phosphate synthase (UDP-forming)
S_scaffold_274_4
CG_Caldi_01, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

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4013..5221
DNA (1209bp) protein (403aa)
glycosyl transferase, group 1; K13057 trehalose synthase [EC:2.4.1.245] Tax=CG_Caldi_01
trehalose synthase (EC:2.4.1.245)
Trehalose synthase
S_scaffold_274_5
Thermococcus onnurineus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(5223..6281)
DNA (1059bp) protein (353aa)
nucleotidyltransferase
Nucleotidyltransferase {ECO:0000313|EMBL:ACJ17332.1}; TaxID=523850 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus onnurineus (strai
Nucleotidyltransferase
S_scaffold_274_6
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6405..7577
DNA (1173bp) protein (391aa)
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGA90248.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis
Glycosyltransferase
S_scaffold_274_7
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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comp(7543..8517)
DNA (975bp) protein (325aa)
glycosyltransferase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
group 1 glycosyl transferase
Glycosyl transferase group 1
S_scaffold_274_8
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8553..9674)
DNA (1122bp) protein (374aa)
Fe-S oxidoreductase
(Dimethylallyl)adenosine tRNA methylthiotransferase {ECO:0000313|EMBL:AKB49534.1}; TaxID=1434109 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina
Fe-S oxidoreductase
S_scaffold_274_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9671..11071)
DNA (1401bp) protein (467aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanopereden
aspartate kinase
Aspartokinase
S_scaffold_274_10
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11322..12548
DNA (1227bp) protein (409aa)
putative transporter protein
Putative transporter protein {ECO:0000313|EMBL:AET63933.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta ha
Putative transporter protein
S_scaffold_274_11
Vibrio mimicus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12760..13269)
DNA (510bp) protein (170aa)
Uncharacterized protein {ECO:0000313|EMBL:EEW09206.1}; TaxID=671076 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio mimicus VM573.;"
hypothetical protein
Putative uncharacterized protein
S_scaffold_274_12
unknown

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comp(13332..13517)
DNA (186bp) protein (62aa)
S_scaffold_274_13

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13831..15543
DNA (1713bp) protein (571aa)
Chloride channel {ECO:0000313|EMBL:AAU83008.1}; TaxID=285406 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos26B2.;"
Cl-channel voltage-gated family protein
Chloride channel
S_scaffold_274_14
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(15773..16693)
DNA (921bp) protein (307aa)
Tetrahydromethanopterin S-methyltransferase, subunit H {ECO:0000313|EMBL:ETA67592.1}; EC=2.1.1.86 {ECO:0000313|EMBL:ETA67592.1};; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methan
tetrahydromethanopterin S-methyltransferase subunit MtrH (EC:2.1.1.86)
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit H
S_scaffold_274_15
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(16706..16930)
DNA (225bp) protein (75aa)
Tetrahydromethanopterin S-methyltransferase subunit G {ECO:0000256|HAMAP-Rule:MF_01500}; EC=2.1.1.86 {ECO:0000256|HAMAP-Rule:MF_01500};; N5-methyltetrahydromethanopterin--coenzyme M methyltransferase
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit G
Tetrahydromethanopterin S-methyltransferase subunit G
S_scaffold_274_16
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(16933..17172)
DNA (240bp) protein (80aa)
Tetrahydromethanopterin S-methyltransferase subunit F {ECO:0000256|HAMAP-Rule:MF_01099}; EC=2.1.1.86 {ECO:0000256|HAMAP-Rule:MF_01099};; N5-methyltetrahydromethanopterin--coenzyme M methyltransferase
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit F (EC:2.1.1.86)
Tetrahydromethanopterin S-methyltransferase subunit F
S_scaffold_274_17
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17175..17897)
DNA (723bp) protein (241aa)
mtrA-1; N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A (EC:2.1.1.86)
Tetrahydromethanopterin S-methyltransferase subunit A {ECO:0000256|HAMAP-Rule:MF_01093}; EC=2.1.1.86 {ECO:0000256|HAMAP-Rule:MF_01093};; N5-methyltetrahydromethanopterin--coenzyme M methyltransferase
Tetrahydromethanopterin S-methyltransferase subunit A
S_scaffold_274_18
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17899..18228)
DNA (330bp) protein (110aa)
Tetrahydromethanopterin S-methyltransferase subunit B {ECO:0000256|HAMAP-Rule:MF_01094}; EC=2.1.1.86 {ECO:0000256|HAMAP-Rule:MF_01094};; N5-methyltetrahydromethanopterin--coenzyme M methyltransferase
tetrahydromethanopterin S-methyltransferase, subunit B
Tetrahydromethanopterin S-methyltransferase subunit B
S_scaffold_274_19
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(18229..19053)
DNA (825bp) protein (275aa)
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit C (EC:2.1.1.86)
Tetrahydromethanopterin S-methyltransferase subunit C {ECO:0000256|HAMAP-Rule:MF_01096}; EC=2.1.1.86 {ECO:0000256|HAMAP-Rule:MF_01096};; N5-methyltetrahydromethanopterin--coenzyme M methyltransferase
Tetrahydromethanopterin S-methyltransferase subunit C
S_scaffold_274_20
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19050..19751)
DNA (702bp) protein (234aa)
Tetrahydromethanopterin S-methyltransferase subunit D {ECO:0000256|HAMAP-Rule:MF_01097}; EC=2.1.1.86 {ECO:0000256|HAMAP-Rule:MF_01097};; N5-methyltetrahydromethanopterin--coenzyme M methyltransferase
tetrahydromethanopterin S-methyltransferase, subunit D (EC:2.1.1.86)
Tetrahydromethanopterin S-methyltransferase subunit D
S_scaffold_274_21
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(19748..20650)
DNA (903bp) protein (301aa)
tetrahydromethanopterin S-methyltransferase subunit E (EC:2.1.1.86)
Tetrahydromethanopterin S-methyltransferase subunit E {ECO:0000255|HAMAP-Rule:MF_01098}; EC=2.1.1.86 {ECO:0000255|HAMAP-Rule:MF_01098};; N5-methyltetrahydromethanopterin--coenzyme M methyltransferase
Tetrahydromethanopterin S-methyltransferase subunit E
S_scaffold_274_22
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20809..21840
DNA (1032bp) protein (344aa)
porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; Flags: Precursor;; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; M
Delta-aminolevulinic acid dehydratase
S_scaffold_274_23

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21825..22679
DNA (855bp) protein (285aa)
Putative uncharacterized protein {ECO:0000313|EMBL:CBH36608.1}; Putative uncharacterized protein C1_0050 {ECO:0000313|EMBL:CAI64085.1}; TaxID=115547 species="Archaea; environmental samples.;" source="
methanogenesis marker protein 8
Putative uncharacterized protein
S_scaffold_274_24

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comp(22680..23324)
DNA (645bp) protein (215aa)
Uncharacterized protein {ECO:0000313|EMBL:EKE01198.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Putative uncharacterized protein
S_scaffold_274_25
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(23806..24423)
DNA (618bp) protein (206aa)
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ABK14105.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosa
CDP-alcohol phosphatidyltransferase
S_scaffold_274_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24420..24791)
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70571.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
hypothetical protein
Putative uncharacterized protein
S_scaffold_274_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(24788..25429)
DNA (642bp) protein (214aa)
Small GTP-binding protein domain {ECO:0000313|EMBL:KCZ70572.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoper
small GTP-binding protein domain protein
Small GTP-binding protein domain protein
S_scaffold_274_28
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(25467..27257)
DNA (1791bp) protein (597aa)
Indolepyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:KKH76157.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Me
iorA; indolepyruvate oxidoreductase subunit
Putative indolepyruvate ferredoxin oxidoreductase, alpha subunit
S_scaffold_274_29
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(27364..28362)
DNA (999bp) protein (333aa)
methanogenesis marker protein 2
Methanogenesis marker protein 2 {ECO:0000313|EMBL:AEH61405.1}; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="Methanosal
Methanogenesis marker protein 2
S_scaffold_274_30
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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28761..29120
DNA (360bp) protein (120aa)
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:ADE35642.1}; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="Methano
Transposase, IS605 OrfB family
Displaying 30 items

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