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S_scaffold_217

Alias: S_Methanogen_56_636_24

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_217_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(93..1214)
DNA (1122bp) protein (374aa)
class I/II aminotransferase; K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RBG_16_Euryarchaeota_41_19_curated
aminotransferase (EC:2.6.1.-)
Aspartate aminotransferase
S_scaffold_217_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1261..2469)
DNA (1209bp) protein (403aa)
TIGR00375 family protein {ECO:0000313|EMBL:KCZ73703.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
PHP domain-containing protein
Putative uncharacterized protein
S_scaffold_217_3
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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2598..2957
DNA (360bp) protein (120aa)
Ferredoxin thioredoxin reductase beta chain {ECO:0000313|EMBL:EHQ36356.1}; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" sour
ferredoxin thioredoxin reductase subunit beta
Ferredoxin thioredoxin reductase beta chain
S_scaffold_217_4
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2963..3430
DNA (468bp) protein (156aa)
Fe-S cluster domain-containing protein
Fe-S cluster domain protein {ECO:0000313|EMBL:ADI74289.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalob
Fe-S cluster domain protein
S_scaffold_217_5
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3427..4902
DNA (1476bp) protein (492aa)
ADP-dependent phosphofructokinase (EC:2.7.1.146)
ADP-dependent phosphofructokinase {ECO:0000313|EMBL:AKB55496.1}; EC=2.7.1.146 {ECO:0000313|EMBL:AKB55496.1};; TaxID=1434108 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methano
ADP-specific phosphofructokinase
S_scaffold_217_6

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4930..5826
DNA (897bp) protein (299aa)
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39211.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
radical SAM domain-containing protein
Putative uncharacterized protein
S_scaffold_217_7
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5903..6958)
DNA (1056bp) protein (352aa)
Tetrahedral aminopeptidase {ECO:0000313|EMBL:AKB24174.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcin
Tetrahedral aminopeptidase
Cellulase
S_scaffold_217_8
unknown

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7135..7458
DNA (324bp) protein (108aa)
S_scaffold_217_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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7746..8243
DNA (498bp) protein (166aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
Uncharacterized protein
S_scaffold_217_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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8240..8719
DNA (480bp) protein (160aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
DUF2240 family protein
S_scaffold_217_11
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8699..9760)
DNA (1062bp) protein (354aa)
metalloenzyme domain-containing protein
Metalloenzyme domain protein {ECO:0000313|EMBL:ABK14772.1}; Flags: Precursor;; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" sourc
Metalloenzyme domain protein
S_scaffold_217_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9842..10354)
DNA (513bp) protein (171aa)
Uncharacterized protein {ECO:0000313|EMBL:EFW90584.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
putative KEOPS complex component
Putative uncharacterized protein
S_scaffold_217_13
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


10435..10944
DNA (510bp) protein (170aa)
rpl10e; 50S ribosomal protein L10e
50S ribosomal protein L10e {ECO:0000256|HAMAP-Rule:MF_00448, ECO:0000256|SAAS:SAAS00015362}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methano
50S ribosomal protein L10e
S_scaffold_217_14
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10954..11559
DNA (606bp) protein (202aa)
Translation initiation factor 2 subunit beta {ECO:0000256|HAMAP-Rule:MF_00232}; aIF2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; eIF-2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; TaxID=1434118 species="Archae
Eukaryotic translation initiation factor 2 beta subunit
Translation initiation factor 2 subunit beta
S_scaffold_217_15
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11587..11946)
DNA (360bp) protein (120aa)
hypothetical protein
Uncharacterized protein conserved in archaea {ECO:0000313|EMBL:AFD00066.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="M
Uncharacterized protein conserved in archaea
S_scaffold_217_16
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12068..12652
DNA (585bp) protein (195aa)
putative Cro-like protein
Putative Cro-like protein {ECO:0000313|EMBL:AKB55427.1}; TaxID=1434108 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina
Transcriptional regulator, XRE family
S_scaffold_217_17
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12657..13787
DNA (1131bp) protein (377aa)
Serine--glyoxylate aminotransferase {ECO:0000313|EMBL:AKB24556.1}; EC=2.6.1.45 {ECO:0000313|EMBL:AKB24556.1};; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methan
phosphoserine aminotransferase / L-aspartate aminotransferase
Phosphoserine aminotransferase / L-aspartate aminotransferase
S_scaffold_217_18
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13796..14491
DNA (696bp) protein (232aa)
radB; DNA repair and recombination protein RadB
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" so
DNA repair and recombination protein RadB
S_scaffold_217_19
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14494..15531
DNA (1038bp) protein (346aa)
tRNA-(G10-N2) methyltransferase {ECO:0000313|EMBL:AKB15614.1}; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanos
trmL; N2-methylguanosine tRNA methyltransferase
N2-methylguanosine tRNA methyltransferase
S_scaffold_217_20
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15536..16246
DNA (711bp) protein (237aa)
UPF0280 protein MSMTP_1935 {ECO:0000256|HAMAP-Rule:MF_01079}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosa
hypothetical protein
UPF0280 protein Mzhil_0896
S_scaffold_217_21
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16248..17075
DNA (828bp) protein (276aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=990316 species="Archaea; Eurya
Diaminopimelate epimerase
S_scaffold_217_22
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17124..18974)
DNA (1851bp) protein (617aa)
NhaP-type Na+(K+)/H+ antiporter {ECO:0000313|EMBL:ETA68590.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolob
sodium/hydrogen exchanger
Sodium/hydrogen antiporter
S_scaffold_217_23
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

19292..20368
DNA (1077bp) protein (359aa)
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family Tax=RBG_13_Chloroflexi_51_36_curated
arsenical-resistance protein
aar:Acear_2029 arsenical-resistance protein; K03325 arsenite transporter, ACR3 family alias=scaffold_7_112,RBG2_C00007G00112 id=1242308 tax=RBG2 species=Methanolinea tarda genus=Methanolinea taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota
S_scaffold_217_24
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20428..20742
DNA (315bp) protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:ADH85718.1}; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivib
Putative uncharacterized protein
S_scaffold_217_25
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(20744..21304)
DNA (561bp) protein (187aa)
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGN27007.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccu
Uncharacterized protein
S_scaffold_217_26
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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comp(21323..22879)
DNA (1557bp) protein (519aa)
ATPase AAA (EC:3.6.4.3 3.6.1.3)
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:EDY37099.1}; EC=3.6.1.3 {ECO:0000313|EMBL:ADD08216.1};; EC=3.6.4.3 {ECO:0000313|EMBL:ADD08216.1};; TaxID=439481 species="Archaea; Euryarchaeota; Ac
AAA family ATPase, CDC48 subfamily
Displaying 26 items

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