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S_scaffold_123

Alias: S_Methanogen_56_636_21

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_123_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2..1525)
DNA (1524bp) protein (508aa)
ATPase (PilT family) {ECO:0000313|EMBL:KCZ73550.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" sou
PilT family ATPase
ATPase, PilT family
S_scaffold_123_2
Thermococcus sp. AM4, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(1599..1892)
DNA (294bp) protein (98aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEB75059.1}; TaxID=246969 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. AM4.;"
Uncharacterized protein
S_scaffold_123_3
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1911..2402)
DNA (492bp) protein (164aa)
hypothetical protein
Probable ribosome biogenesis protein Metho_1744 {ECO:0000256|HAMAP-Rule:MF_01116}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylov
Probable ribosome biogenesis protein Metho_1744
S_scaffold_123_4
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2402..2947)
DNA (546bp) protein (182aa)
TATA binding protein of transcription factor TFIID
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
TATA-box-binding protein
S_scaffold_123_5
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3068..5119
DNA (2052bp) protein (684aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET65174.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundi
Uncharacterized protein
S_scaffold_123_6
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5116..5646
DNA (531bp) protein (177aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Met
phosphoesterase
Phosphoesterase
S_scaffold_123_7
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5639..7087
DNA (1449bp) protein (483aa)
cobQ; adenosylcobyric acid synthase (EC:6.3.5.10)
Probable cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocell
Probable cobyric acid synthase
S_scaffold_123_8
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

7156..7719
DNA (564bp) protein (188aa)
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:ADB57089.1}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus profundus
Isochorismatase hydrolase
S_scaffold_123_9
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7925..9226
DNA (1302bp) protein (434aa)
Methyl coenzyme M reductase beta subunit {ECO:0000313|EMBL:AKB23565.1}; EC=2.8.4.1 {ECO:0000313|EMBL:AKB23565.1};; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Me
methyl coenzyme M reductase, subunit beta
Methyl coenzyme M reductase, subunit beta
S_scaffold_123_10
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9242..9739
DNA (498bp) protein (166aa)
Methyl coenzyme M reductase operon protein D
Methyl coenzyme M reductase operon protein D {ECO:0000313|EMBL:AKB49355.1}; TaxID=1434109 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" sou
Methyl-coenzyme M reductase operon protein D
S_scaffold_123_11
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9745..10356
DNA (612bp) protein (204aa)
mcrC; methyl-coenzyme M reductase I operon protein C
Methyl-coenzyme M reductase I operon protein C {ECO:0000313|EMBL:AFC99666.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source=
Methyl-coenzyme M reductase operon protein C
S_scaffold_123_12
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10432..11115
DNA (684bp) protein (228aa)
Methyl coenzyme M reductase gamma subunit {ECO:0000313|EMBL:AKB13401.1}; EC=2.8.4.1 {ECO:0000313|EMBL:AKB13401.1};; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Me
Methyl coenzyme M reductase gamma subunit (EC:2.8.4.1)
Methyl-coenzyme M reductase, gamma subunit
S_scaffold_123_13
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11122..12831
DNA (1710bp) protein (570aa)
Methyl coenzyme M reductase alpha subunit (EC:2.8.4.1)
Methyl coenzyme M reductase alpha subunit {ECO:0000313|EMBL:AKB45682.1}; EC=2.8.4.1 {ECO:0000313|EMBL:AKB45682.1};; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; M
Methyl-coenzyme M reductase subunit alpha
S_scaffold_123_14
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12887..13099)
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB25391.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
S_scaffold_123_15
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

13161..13883
DNA (723bp) protein (241aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN26810.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source
Putative uncharacterized protein
S_scaffold_123_16
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14071..14262
DNA (192bp) protein (64aa)
CopG-like domain-containing protein DNA-binding {ECO:0000313|EMBL:EJG06869.1}; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" s
putative transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain
CopG-like domain-containing protein DNA-binding
S_scaffold_123_17
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14288..15466
DNA (1179bp) protein (393aa)
ftsZ-1; cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanoc
Cell division protein FtsZ
S_scaffold_123_18
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15588..16553
DNA (966bp) protein (322aa)
UDP-galactose/glucose pyrophosphorylase {ECO:0000313|EMBL:ABE51422.1}; EC=2.7.7.- {ECO:0000313|EMBL:ABE51422.1};; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Meth
sulfate adenylyltransferase
UDP-galactose/glucose pyrophosphorylase
S_scaffold_123_19
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16538..16774)
DNA (237bp) protein (79aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH61261.1}; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="Methanosalsum zhil
Putative uncharacterized protein
S_scaffold_123_20
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16828..18099
DNA (1272bp) protein (424aa)
glutamate-1-semialdehyde-2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminot
Glutamate-1-semialdehyde 2,1-aminomutase
S_scaffold_123_21
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18113..19384
DNA (1272bp) protein (424aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_0
3-phosphoshikimate 1-carboxyvinyltransferase
Probable 3-phosphoshikimate 1-carboxyvinyltransferase
S_scaffold_123_22
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(19411..20205)
DNA (795bp) protein (265aa)
MjaII restriction endonuclease Tax=CG_Micra_03
MjaII restriction endonuclease
restriction endonuclease
S_scaffold_123_23
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20214..21653)
DNA (1440bp) protein (480aa)
putative RNA methylase Tax=S_Thermoanaerobacterales_50_218
putative RNA methylase
putative RNA methylase
S_scaffold_123_24
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21735..22769
DNA (1035bp) protein (345aa)
Elongation factor Tu {ECO:0000313|EMBL:KGK98514.1}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides met
elongation factor Tu domain 2 protein
Elongation factor Tu domain 2 protein
S_scaffold_123_25

Not on your lists

comp(22759..23535)
DNA (777bp) protein (259aa)
TRNA (1-methyladenosine) methyltransferase {ECO:0000313|EMBL:AAU83843.1}; TaxID=285409 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos34G5.;"
tRNA (adenine-N(1)-)-methyltransferase
TRNA(1-methyladenosine) methyltransferase
Displaying 25 items

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