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S_scaffold_123_4

Organism: S_Methanosarcinales_56_1174

near complete RP 30 / 55 MC: 1 BSCG 18 / 51 ASCG 36 / 38
Location: comp(2402..2947)

Top 3 Functional Annotations

Value Algorithm Source
TATA binding protein of transcription factor TFIID KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 179.0
  • Bit_score: 280
  • Evalue 2.50e-73
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 179.0
  • Bit_score: 280
  • Evalue 1.20e-72
TATA-box-binding protein similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 272
  • Evalue 7.60e-71

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Taxonomy

Methanohalophilus mahii → Methanohalophilus → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 546
ATGGCTGAGATAAAGATTGAGAATGTGGTGGCATCTACAAAGCTCGCGGAGTCGTTCGACCTCAACAAGATAGTGGAGGAGTTCGAGGAGGCGGAGTACAACAAGAAGAAGTTTCCCGGGCTTGTGTACAGGGTGAAGAATCCCAAGGCGGCGTTCCTCGTGTTCACCTCTGGCAAGATTGTGTGTACAGGTACCAAGAGCGTGGAGAACGTGCACACCGTGATCAACATGATTGCCAAGAAGATGAGAGAGCATGGCATACCGACGCTGGACAAGCCGGACATCAGAGTGCAGAACATCGTTGCCTCTGCGGACCTTGGAAGCGAGCTCAACCTGAATGCCATTGCCATAGGGCTTGGGTTCGAGAACATTGAGTACGAGCCAGAGCAGTTTCCGGGGCTGGTGTACAGGCTGGACGAGCCACGGGTGGTGGTGCTCATATTCAGCTCTGGCAAGCTCGTGGTCACGGGAGGCAAGTCCCCAGAGGCATGCATGGAGGGCGTGGACAAGGTGAGACAGCAGCTCGAGAGCATGGGAATGCTGTGA
PROTEIN sequence
Length: 182
MAEIKIENVVASTKLAESFDLNKIVEEFEEAEYNKKKFPGLVYRVKNPKAAFLVFTSGKIVCTGTKSVENVHTVINMIAKKMREHGIPTLDKPDIRVQNIVASADLGSELNLNAIAIGLGFENIEYEPEQFPGLVYRLDEPRVVVLIFSSGKLVVTGGKSPEACMEGVDKVRQQLESMGML*