ggKbase home page

S_scaffold_634

Alias: S_Methanogen_56_636_47

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_634_1
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..315)
DNA (315bp) protein (105aa)
Pyrrolysine-tRNA ligase
Pyrrolysyl-tRNA synthetase
Tax=BJP_08E140C01_Clostridiales_46_19
S_scaffold_634_2
unknown

Not on your lists

comp(733..936)
DNA (204bp) protein (68aa)
S_scaffold_634_3
unknown

Not on your lists

comp(1114..1539)
DNA (426bp) protein (142aa)
S_scaffold_634_4
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2358..3149
DNA (792bp) protein (264aa)
cytidine deaminase
Cytidine deaminase {ECO:0000313|EMBL:AEB69675.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (str
Cytidine deaminase
S_scaffold_634_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3129..3614)
DNA (486bp) protein (162aa)
Putative RNA-binding protein {ECO:0000313|EMBL:EJN59487.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
RNA-binding protein
Putative RNA-binding protein
S_scaffold_634_6
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3714..3929
DNA (216bp) protein (72aa)
small nuclear ribonucleoprotein
Putative snRNP Sm-like protein {ECO:0000256|HAMAP-Rule:MF_00257}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="
Putative snRNP Sm-like protein
S_scaffold_634_7
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4122..5576
DNA (1455bp) protein (485aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase
S_scaffold_634_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


5659..5949
DNA (291bp) protein (97aa)
rpl21e; 50S ribosomal protein L21
50S ribosomal protein L21e
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
S_scaffold_634_9
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5972..6337
DNA (366bp) protein (122aa)
Uncharacterized protein conserved in archaea {ECO:0000313|EMBL:ETA67055.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ETA67055.1};; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales
DNA-directed RNA polymerase, subunit F (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit F
S_scaffold_634_10
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6395..6967
DNA (573bp) protein (191aa)
Putative RNA-binding protein {ECO:0000313|EMBL:ETA67056.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus
putative RNA-binding protein
Putative RNA-binding protein
S_scaffold_634_11
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


6968..7804
DNA (837bp) protein (279aa)
16S rRNA methyltransferase {ECO:0000313|EMBL:KKH48943.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcin
ksgA; dimethyladenosine transferase
Probable ribosomal RNA small subunit methyltransferase A
S_scaffold_634_12
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7779..8966)
DNA (1188bp) protein (396aa)
S-layer family duplication domain protein {ECO:0000313|EMBL:AKB26662.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source
S-layer-like domain-containing protein
DUF1608 containing protein
Displaying 12 items

View Taxonomy