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S_scaffold_170

Alias: S_Methanogen_56_636_27

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_scaffold_170_1
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..895)
DNA (894bp) protein (298aa)
Group 1 glycosyl transferase {ECO:0000313|EMBL:EKF86489.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methano
group 1 glycosyl transferase
Group 1 glycosyl transferase
S_scaffold_170_2
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(956..1522)
DNA (567bp) protein (189aa)
dTDP-4-dehydrorhamnose 3,5-epimerase
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AEH25433.1}; TaxID=529709 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus yayanos
dTDP-4-dehydrorhamnose 3,5-epimerase
S_scaffold_170_3
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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1667..2665
DNA (999bp) protein (333aa)
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis {ECO:0000313|EMBL:AFC98942.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellale
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis
S_scaffold_170_4
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2891..4234
DNA (1344bp) protein (448aa)
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:ADI73059.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Met
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
S_scaffold_170_5
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

4247..4942
DNA (696bp) protein (232aa)
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEA47811.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus ve
Putative uncharacterized protein
S_scaffold_170_6
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4943..6184)
DNA (1242bp) protein (414aa)
erf1; peptide chain release factor eRF/aRF subunit 1
Peptide chain release factor subunit 1 {ECO:0000256|HAMAP-Rule:MF_00424}; Translation termination factor aRF1 {ECO:0000256|HAMAP-Rule:MF_00424}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanom
Peptide chain release factor subunit 1
S_scaffold_170_7
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6406..7407
DNA (1002bp) protein (334aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000313|EMBL:AKB85642.1}; EC=1.1.1.3 {ECO:0000313|EMBL:AKB85642.1};; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae
Homoserine dehydrogenase
S_scaffold_170_8
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7404..8543
DNA (1140bp) protein (380aa)
Sep-tRNA:Cys-tRNA synthase (EC:2.5.1.73)
O-phospho-L-seryl-tRNA:Cys-tRNA synthase {ECO:0000256|HAMAP-Rule:MF_01675}; EC=2.5.1.73 {ECO:0000256|HAMAP-Rule:MF_01675};; Sep-tRNA:Cys-tRNA synthase {ECO:0000256|HAMAP-Rule:MF_01675}; TaxID=1041930
O-phospho-L-seryl-tRNA:Cys-tRNA synthase
S_scaffold_170_9
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

8928..10790
DNA (1863bp) protein (621aa)
Coenzyme F420 hydrogenase., Hydrogensulfite reductase {ECO:0000313|EMBL:AEF96582.1}; EC=1.12.98.1 {ECO:0000313|EMBL:AEF96582.1};; EC=1.8.99.3 {ECO:0000313|EMBL:AEF96582.1};; TaxID=880724 species="Arch
Coenzyme F420 hydrogenase., hydrogensulfite reductase
Coenzyme F420 hydrogenase., Hydrogensulfite reductase
S_scaffold_170_10
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11230..11607
DNA (378bp) protein (126aa)
30S ribosomal protein S8e
30S ribosomal protein S8e {ECO:0000255|HAMAP-Rule:MF_00029}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta th
30S ribosomal protein S8e
S_scaffold_170_11
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(11622..12686)
DNA (1065bp) protein (355aa)
Glycosyl transferase 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACS91106.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus
Glycosyl transferase family 2
S_scaffold_170_12
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12775..13710
DNA (936bp) protein (312aa)
Potassium efflux system KefA protein {ECO:0000313|EMBL:AKB84527.1}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="M
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel
S_scaffold_170_13
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13713..14219)
DNA (507bp) protein (169aa)
Cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:AKB36691.1}; EC=2.5.1.17 {ECO:0000313|EMBL:AKB36691.1};; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosa
Cob(I)alamin adenosyltransferase
Cob(I)alamin adenosyltransferase
S_scaffold_170_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14234..15220)
DNA (987bp) protein (329aa)
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Meth
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY
S_scaffold_170_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(15217..15654)
DNA (438bp) protein (146aa)
prefoldin alpha subunit/subunit 5 Tax=RBG_16_Euryarchaeota_41_19_curated
prefoldin subunit alpha
Prefoldin subunit alpha
S_scaffold_170_16
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(15656..15841)
DNA (186bp) protein (62aa)
rplX; 50S ribosomal protein LX
50S ribosomal protein L18Ae {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000256|HAMAP-Rule:MF_00273}; TaxID=1094980 s
50S ribosomal protein LX
S_scaffold_170_17
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15854..16537)
DNA (684bp) protein (228aa)
translation initiation factor IF-6
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Met
Translation initiation factor 6
S_scaffold_170_18
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16548..16808)
DNA (261bp) protein (87aa)
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococ
50S ribosomal protein L31e
50S ribosomal protein L31e
S_scaffold_170_19
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16818..16970)
DNA (153bp) protein (51aa)
rpl39e; 50S ribosomal protein L39e
50S ribosomal protein L39e {ECO:0000255|HAMAP-Rule:MF_00629}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanoc
50S ribosomal protein L39e
S_scaffold_170_20
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(16967..17575)
DNA (609bp) protein (203aa)
ATPase
ATPase {ECO:0000313|EMBL:AEH25359.1}; TaxID=529709 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus yayanosii (strain CH1 / JCM 16557).;"
ATPase
S_scaffold_170_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(17575..17916)
DNA (342bp) protein (114aa)
DNA-binding TFAR19-related protein Tax=RBG_16_Euryarchaeota_41_19_curated
DNA-binding protein
DNA-binding protein MCON_2624
S_scaffold_170_22
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists


comp(17925..18395)
DNA (471bp) protein (157aa)
30S ribosomal protein S19
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus vene
30S ribosomal protein S19e
S_scaffold_170_23
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18520..19509
DNA (990bp) protein (330aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV23543.1}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psych
Uncharacterized protein
S_scaffold_170_24
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19493..19975
DNA (483bp) protein (161aa)
Acetyltransferase {ECO:0000313|EMBL:ETA68418.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius D
ribosomal-protein-alanine acetyltransferase
Ribosomal-protein-alanine acetyltransferase
S_scaffold_170_25
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19923..20684
DNA (762bp) protein (254aa)
Deoxyribonuclease V (EC:3.1.21.7)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-
Endonuclease V
S_scaffold_170_26
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20734..20904
DNA (171bp) protein (57aa)
amino acid-binding ACT domain-containing protein
Amino acid-binding ACT domain protein {ECO:0000313|EMBL:ABK14496.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methano
Amino acid-binding ACT domain protein
Displaying 26 items

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