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SCN18_25_8_15_R2_B_scaffold_1651

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1651_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..659
DNA (657bp) protein (219aa)
Tetratricopeptide TPR_2 id=1884098 bin=GWE2_Bacteroidetes_40_63 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
integral membrane sensor signal transduction histidine kinase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
SCN18_25_8_15_R2_B_scaffold_1651_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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684..1295
DNA (612bp) protein (204aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Imtechella halotolerans K1 RepID=I0WEA0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAO43052.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
SCN18_25_8_15_R2_B_scaffold_1651_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2190..2300
DNA (111bp) protein (37aa)
SCN18_25_8_15_R2_B_scaffold_1651_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2346..2543
DNA (198bp) protein (66aa)
SCN18_25_8_15_R2_B_scaffold_1651_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2472..8078)
DNA (5607bp) protein (1869aa)
RHS repeat-associated core domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KRN7_HALH1
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AEE49026.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCN18_25_8_15_R2_B_scaffold_1651_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8126..16594)
DNA (8469bp) protein (2823aa)
Parallel beta-helix repeat protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KRN8_HALH1
parallel beta-helix repeat-containing protein
Parallel beta-helix repeat protein {ECO:0000313|EMBL:AEE49027.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCN18_25_8_15_R2_B_scaffold_1651_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16750..17352
DNA (603bp) protein (201aa)
DNA-directed RNA polymerase specialized sigma subunit n=1 Tax=Formosa sp. AK20 RepID=M7N1K8_9FLAO
DNA-directed RNA polymerase specialized sigma subunit {ECO:0000313|EMBL:EMQ95634.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
sigma-70 family RNA polymerase sigma factor
SCN18_25_8_15_R2_B_scaffold_1651_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17363..18100
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Formosa sp. AK20 RepID=M7NAW9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EMQ95633.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1651_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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18225..19187
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0003674EAF
Putative uncharacterized protein {ECO:0000313|EMBL:EDV25090.1}; TaxID=10228 species="Eukaryota; Metazoa; Placozoa; Trichoplax.;" source="Trichoplax adhaerens (Trichoplax reptans).;"
SCN18_25_8_15_R2_B_scaffold_1651_10
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19358..21343
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Formosa sp. AK20 RepID=M7MHA2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EMQ95632.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1651_11
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21717..22388
DNA (672bp) protein (224aa)
SCN18_25_8_15_R2_B_scaffold_1651_trna_1
unknown

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comp(22679..22767)
DNA (89bp)
transferRNA Ser
SCN18_25_8_15_R2_B_scaffold_1651_12
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(22821..23096)
DNA (276bp) protein (92aa)
Acylphosphatase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI51_CHIPD
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
acylphosphatase
SCN18_25_8_15_R2_B_scaffold_1651_13
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23152..23907)
DNA (756bp) protein (252aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THJ8_NIAKG
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
chromosomal replication initiator protein DnaA
Displaying 14 items

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