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SCN18_14_9_16_R3_B_scaffold_4

Search features with annotation key words

Displaying items 121-150 of 700 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R3_B_scaffold_4_119
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(136670..137068)
DNA (399bp) protein (133aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_4_120
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(137138..138331)
DNA (1194bp) protein (398aa)
Acetyl-CoA acetyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT6_NIAKG
acetyl-CoA acetyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_4_121
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

138355..139455
DNA (1101bp) protein (367aa)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Niabella soli DSM 19437 RepID=H1NR28_9SPHI
50S rRNA methyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_4_122
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

139559..140806
DNA (1248bp) protein (416aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Pseudouridine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT1_NIAKG
pseudouridine synthase Rsu
SCN18_14_9_16_R3_B_scaffold_4_123
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

140932..141642
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C1355
pseudouridine synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_4_124
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(141709..143025)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036E2198
DNA mismatch repair protein MutS domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_4_125
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(143105..144445)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368831F
Allantoinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_4_126
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

144486..146168
DNA (1683bp) protein (561aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362D28D
Uncharacterized protein {ECO:0000313|EMBL:KIC92499.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCN18_14_9_16_R3_B_scaffold_4_127
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(146165..146893)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003615D56
putative protein-translocating porin PorT
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_4_128
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(146863..147603)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B76F8
demethylmenaquinone methyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_4_129
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(147683..148717)
DNA (1035bp) protein (345aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.1.-)
Holliday junction DNA helicase RuvB n=1 Tax=Segetibacter koreensis RepID=UPI00037F18AD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_4_130
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

148741..149418
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FI45_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EJF09989.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
oxidoreductase
SCN18_14_9_16_R3_B_scaffold_4_131
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

149464..149892
DNA (429bp) protein (143aa)
Transcriptional regulator, MarR family n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JVE6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIC92878.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
MarR family transcriptional regulator
SCN18_14_9_16_R3_B_scaffold_4_132
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

149938..150837
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11TB3_CYTH3
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
SCN18_14_9_16_R3_B_scaffold_4_133
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

150848..151495
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003602CBC
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AHF16790.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_14_9_16_R3_B_scaffold_4_134
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

151512..152249
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035E8455
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADV84646.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
SCN18_14_9_16_R3_B_scaffold_4_135
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(152311..152499)
DNA (189bp) protein (63aa)
SCN18_14_9_16_R3_B_scaffold_4_136
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(152556..153266)
DNA (711bp) protein (237aa)
Peptidase M23 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ62_CHIPD
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ACU58751.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_14_9_16_R3_B_scaffold_4_137
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

153315..156527
DNA (3213bp) protein (1071aa)
TolB protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2EBL4_9BACT
TolB protein {ECO:0000313|EMBL:EOZ99768.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
peptidase S41
SCN18_14_9_16_R3_B_scaffold_4_138
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

156583..157266
DNA (684bp) protein (228aa)
SCN18_14_9_16_R3_B_scaffold_4_139
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(157531..158745)
DNA (1215bp) protein (405aa)
alanine dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI00037300D9
Alanine dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_4_140
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(158798..159283)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003698964
ATP/GTP hydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_4_141
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

159343..161478
DNA (2136bp) protein (712aa)
Heavy metal translocating P-type ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP56_NIAKG
heavy metal translocating P-type ATPase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_4_142
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

161559..163466
DNA (1908bp) protein (636aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A5747
RecQ familyATP-dependent DNA helicase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_4_143
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(163463..163834)
DNA (372bp) protein (124aa)
Chaperonin Cpn10 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP52_NIAKG
Chaperonin {ECO:0000313|EMBL:KIC92875.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
chaperonin Cpn10
SCN18_14_9_16_R3_B_scaffold_4_144
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

163885..164694
DNA (810bp) protein (270aa)
transcriptional regulator n=1 Tax=Segetibacter koreensis RepID=UPI00037F3BB6
two component transcriptional regulator, winged helix family
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_4_145
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(164741..165133)
DNA (393bp) protein (131aa)
Thioesterase superfamily protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EJF3_RUNSL
thioesterase
Thioesterase superfamily protein {ECO:0000313|EMBL:AEI50447.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCN18_14_9_16_R3_B_scaffold_4_146
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(165126..165650)
DNA (525bp) protein (175aa)
Ribosome maturation factor RimM n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQL0_NIAKG
16S rRNA processing protein RimM
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_4_147
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(165731..166174)
DNA (444bp) protein (148aa)
30S ribosomal protein S16 n=1 Tax=Segetibacter koreensis RepID=UPI0003720DEA
30S ribosomal protein S16
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_4_148
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(166337..167671)
DNA (1335bp) protein (445aa)
signal recognition particle n=1 Tax=Segetibacter koreensis RepID=UPI000364F953
signal recognition particle subunit FFH/SRP54 (srp54)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 121-150 of 700 in total

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