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SCN18_14_9_16_R3_B_scaffold_4_146

Organism: SCN18_14_9_16_R3_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_37_82

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(165126..165650)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQL0_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 170.0
  • Bit_score: 184
  • Evalue 6.30e-44
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 170.0
  • Bit_score: 184
  • Evalue 1.80e-44
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 171.0
  • Bit_score: 194
  • Evalue 8.60e-47

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 525
ATGAACGAACAAATTCATGTAGGAAAAATTGCTGCCGTTTTTGGGCTGAAAGGAGAGGTTATTTTAGTACACGTACTGGGTAAAAAAGCTCAATTTAAAAAAGGCGAAGCTATTTTTATTGAAATGATGAAAGGCAGCCTGTTGCCCTATTTTGTTGAGTATTCTAAAGCAAGAACTTCGGAAGAAACCGCAATAAAACTGGAAGGGATAGACACGAAGGAAAAGGCAAAACTTGTTACCGGTAAGCAGGCCTGGATATCGCAGGCACTTTTTCAATCTTATGCGGCCAAGCAGGCAGCTATTTCTTTGCTCGGCTTTTCCATTATTAATGAAGGAAAAAATTTAGGAAAGATAGAAGAAGTCATTGAACAGCCCCACCAGGTACTGGTTACCATAAAAATTAATGGTAAGGAAGTAATGATTCCGCTGCACGAAGAATCATTAATAAAAATAGACAGGAAGAAAAATGAAGTGATTGTTGAATTACCAGAAGGCTTACTGGATATTTATTTAAACAATGAATAA
PROTEIN sequence
Length: 175
MNEQIHVGKIAAVFGLKGEVILVHVLGKKAQFKKGEAIFIEMMKGSLLPYFVEYSKARTSEETAIKLEGIDTKEKAKLVTGKQAWISQALFQSYAAKQAAISLLGFSIINEGKNLGKIEEVIEQPHQVLVTIKINGKEVMIPLHEESLIKIDRKKNEVIVELPEGLLDIYLNNE*