ggKbase home page

SCN18_13_7_16_R5_B_scaffold_815

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R5_B_scaffold_815_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..845)
DNA (843bp) protein (281aa)
transcriptional regulator, GntR family domain (EC:2.6.1.1)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D44A1C
Putative rhizopine catabolism regulatory protein MocR {ECO:0000313|EMBL:EYR81517.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCN18_13_7_16_R5_B_scaffold_815_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1134..1913)
DNA (780bp) protein (260aa)
Class II Aldolase and Adducin N-terminal domain n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q820S8_NITEU
Aldolase {ECO:0000313|EMBL:AKH39429.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
class II aldolase/adducin domain-containing protein
SCN18_13_7_16_R5_B_scaffold_815_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1916..2578)
DNA (663bp) protein (221aa)
Glutathione S-transferase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F6Z4_9BURK
Glutathione S-transferase {ECO:0000313|EMBL:EHK65908.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
glutathione S-transferase
SCN18_13_7_16_R5_B_scaffold_815_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2575..3549)
DNA (975bp) protein (325aa)
Extra-cytoplasmic solute receptor family protein 126 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7STS6_ALCXX
Extra-cytoplasmic solute receptor family protein 126 {ECO:0000313|EMBL:EGP48527.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
twin-arginine translocation pathway signal protein
SCN18_13_7_16_R5_B_scaffold_815_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3635..4165
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037A6363
Putative transcriptional regulator {ECO:0000313|EMBL:EIG57875.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
helix-turn-helix family protein
SCN18_13_7_16_R5_B_scaffold_815_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4244..4897)
DNA (654bp) protein (218aa)
Transcriptional regulator, MarR family n=2 Tax=Oligotropha carboxidovorans RepID=B6JE27_OLICO
MarR family transcriptional regulator {ECO:0000313|EMBL:KHL26607.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
MarR family transcriptional regulator
SCN18_13_7_16_R5_B_scaffold_815_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5139..5690
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFE0_9GAMM
Peroxiredoxin
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCN18_13_7_16_R5_B_scaffold_815_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5934..7181
DNA (1248bp) protein (416aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
argD; succinylornithine transaminase, also has acetylornitine transaminase activity, PLP-dependent (EC:2.6.1.11 2.6.1.-)
Acetylornithine aminotransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QV79_BREDI
SCN18_13_7_16_R5_B_scaffold_815_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7278..8312)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D2989C
Molybdenum cofactor biosysynthesis protein {ECO:0000313|EMBL:EXL04217.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
MOSC domain-containing protein
SCN18_13_7_16_R5_B_scaffold_815_trna_1
unknown

Not on your lists

comp(8032..8102)
DNA (71bp)
transferRNA Cys
SCN18_13_7_16_R5_B_scaffold_815_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8355..9563)
DNA (1209bp) protein (403aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Tryptophan synthase beta chain n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TSK0_9BRAD
tryptophan synthase beta subunit
SCN18_13_7_16_R5_B_scaffold_815_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9560..10801)
DNA (1242bp) protein (414aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cysteine desulfurase, partial n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037C0CEA
SufS subfamily cysteine desulfurase
SCN18_13_7_16_R5_B_scaffold_815_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10983..11243)
DNA (261bp) protein (87aa)
Putative pleiotropic regulatory protein DegT n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A8H1_9PROT
Putative pleiotropic regulatory protein DegT {ECO:0000313|EMBL:EHL95540.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
DegT/DnrJ/EryC1/StrS family protein
Displaying 13 items

View Taxonomy