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SCN18_13_7_16_R2_B_Actinobacteria_71_7

In projects: SCN18_13_7_16_R2_B  |  scn18_genomes

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Description

Extracted from SCN18_13_7_16_R2_B_concoct_064

Displaying items 151-200 of 1267 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_13_7_16_R2_B_scaffold_5035
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 (100%)
1 3521 bp 73.02 7.33 99.94
SCN18_13_7_16_R2_B_scaffold_14561
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
1 1723 bp 67.96 6.96 99.94
SCN18_13_7_16_R2_B_scaffold_14647
Species: SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 (100%)
1 1717 bp 69.71 7.43 99.94
SCN18_13_7_16_R2_B_scaffold_14899
Species: SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial (100%)
1 1696 bp 69.93 8.58 99.94
SCN18_13_7_16_R2_B_scaffold_14912
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 (100%)
1 1696 bp 68.40 7.25 99.94
SCN18_13_7_16_R2_B_scaffold_15261
Species: Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x (100%)
3 1666 bp 75.93 6.75 99.94
SCN18_13_7_16_R2_B_scaffold_15747
Species: Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x (100%)
1 1630 bp 74.11 5.43 99.94
SCN18_13_7_16_R2_B_scaffold_15898
Species: SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial (100%)
1 1618 bp 66.56 5.93 99.94
SCN18_13_7_16_R2_B_scaffold_15948
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 (100%)
2 1615 bp 69.66 7.71 99.94
SCN18_13_7_16_R2_B_scaffold_16400
Species: SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial (100%)
1 1585 bp 72.24 6.25 99.94
SCN18_13_7_16_R2_B_scaffold_16578
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 (100%)
1 1573 bp 70.76 6.39 99.94
SCN18_13_7_16_R2_B_scaffold_17709
Species: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 (100%)
1 1501 bp 72.95 7.40 99.93
SCN18_13_7_16_R2_B_scaffold_18827
Species: Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x (100%)
1 1432 bp 74.72 6.91 99.93
SCN18_13_7_16_R2_B_scaffold_18832
Species: Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x (100%)
1 1432 bp 75.21 7.75 99.93
SCN18_13_7_16_R2_B_scaffold_20045
Species: SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 (100%)
1 1369 bp 75.53 5.15 99.93
SCN18_13_7_16_R2_B_scaffold_20224
Species: SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 (100%)
1 1360 bp 68.16 8.49 99.93
SCN18_13_7_16_R2_B_scaffold_21296
Species: SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 (100%)
2 1309 bp 68.07 6.76 99.92
SCN18_13_7_16_R2_B_scaffold_7966
Species: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9 (100%)
1 2612 bp 68.91 8.56 99.92
SCN18_13_7_16_R2_B_scaffold_22353
Species: Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x (100%)
1 1258 bp 77.03 7.63 99.92
SCN18_13_7_16_R2_B_scaffold_22654
Species: SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 (50%)
2 1246 bp 73.11 8.31 99.92
SCN18_13_7_16_R2_B_scaffold_9340
Species: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9 (100%)
1 2351 bp 70.10 8.29 99.91
SCN18_13_7_16_R2_B_scaffold_9449
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 (100%)
1 2333 bp 68.92 7.27 99.91
SCN18_13_7_16_R2_B_scaffold_24675
Species: SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial (100%)
1 1165 bp 69.27 6.70 99.91
SCN18_13_7_16_R2_B_scaffold_25156
Species: SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 (100%)
1 1147 bp 76.37 7.19 99.91
SCN18_13_7_16_R2_B_scaffold_25391
Species: SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 (100%)
1 1138 bp 72.58 7.38 99.91
SCN18_13_7_16_R2_B_scaffold_25726
Species: Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x (100%)
1 1126 bp 69.01 8.53 99.91
SCN18_13_7_16_R2_B_scaffold_26196
Species: SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial (100%)
1 1108 bp 71.30 6.36 99.91
SCN18_13_7_16_R2_B_scaffold_26461
Species: SCNPILOT_CONT_500_BF_Actinomycetales_73_43 (100%)
1 1099 bp 71.25 6.14 99.91
SCN18_13_7_16_R2_B_scaffold_10494
Species: SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 (100%)
1 2174 bp 71.71 7.52 99.91
SCN18_13_7_16_R2_B_scaffold_26939
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 (100%)
1 1084 bp 70.02 7.61 99.91
SCN18_13_7_16_R2_B_scaffold_27401
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 (100%)
1 1069 bp 68.38 8.56 99.91
SCN18_13_7_16_R2_B_scaffold_5827
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 (50%)
4 3189 bp 73.06 6.30 99.91
SCN18_13_7_16_R2_B_scaffold_28982
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 (100%)
1 1021 bp 74.44 5.44 99.90
SCN18_13_7_16_R2_B_scaffold_29188
Species: SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 (100%)
1 1015 bp 74.48 5.91 99.90
SCN18_13_7_16_R2_B_scaffold_12167
Species: SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 (100%)
1 1964 bp 69.91 5.35 99.90
SCN18_13_7_16_R2_B_scaffold_13462
Species: Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x (50%)
4 1829 bp 68.51 6.89 99.89
SCN18_13_7_16_R2_B_scaffold_14101
Species: SCNPILOT_CONT_500_BF_Actinomycetales_73_43 (100%)
1 1766 bp 69.71 7.22 99.89
SCN18_13_7_16_R2_B_scaffold_14251
Class: Actinobacteria (66.67%)
3 1751 bp 71.90 6.94 99.89
SCN18_13_7_16_R2_B_scaffold_5285
Species: Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x (100%)
3 3406 bp 71.90 7.88 99.88
SCN18_13_7_16_R2_B_scaffold_15045
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 (100%)
1 1685 bp 73.47 7.92 99.88
SCN18_13_7_16_R2_B_scaffold_15365
Species: SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 (100%)
1 1658 bp 69.66 6.15 99.88
SCN18_13_7_16_R2_B_scaffold_15414
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 (100%)
2 1655 bp 69.85 6.53 99.88
SCN18_13_7_16_R2_B_scaffold_15610
Species: SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 (100%)
1 1640 bp 73.29 6.13 99.88
SCN18_13_7_16_R2_B_scaffold_8851
Class: Actinobacteria (50%)
4 2439 bp 71.55 5.54 99.88
SCN18_13_7_16_R2_B_scaffold_9105
Order: Micrococcales (50%)
4 2391 bp 73.90 7.21 99.87
SCN18_13_7_16_R2_B_scaffold_16694
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (100%)
1 1565 bp 73.55 5.94 99.87
SCN18_13_7_16_R2_B_scaffold_16734
Species: SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 (100%)
1 1562 bp 65.94 6.63 99.87
SCN18_13_7_16_R2_B_scaffold_16870
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 (100%)
1 1553 bp 72.38 8.31 99.87
SCN18_13_7_16_R2_B_scaffold_17117
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 (100%)
1 1538 bp 74.32 5.85 99.87
SCN18_13_7_16_R2_B_scaffold_18569
Species: SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 (100%)
1 1448 bp 73.34 6.73 99.86
Displaying items 151-200 of 1267 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.