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SCNpilot_expt_1000_bf_scaffold_687_curated_45

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 51121..52302

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Afipia birgiae RepID=UPI0003160AF4 similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 393.0
  • Bit_score: 742
  • Evalue 3.00e-211
Uncharacterized protein {ECO:0000313|EMBL:EKS41914.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 393.0
  • Bit_score: 741
  • Evalue 7.30e-211
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 393.0
  • Bit_score: 680
  • Evalue 4.50e-193

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGCGTAAAACCGTACTACTGACCGCCGCAGCCGTGACGCTGCTGGCGATGCCGGCATCGGCAGACGATCTCAAGATTGCGCTGATCTACGGCAAGACCGGCCCCCTCGAAGCCTATGCCAAGCAGACCGAAACCGGCCTGCGCATGGGTCTCGAATACGCCACCAAGAACACCATGACCGTGGATGGCCGCAAGATCGTCCTCATCACCAAGGACGATCAGGGCAAGCCCGACCTCGCCAAGGCGGCGCTGGCGGAAGCCTATCAGGACGACAAGGTCGATCTCGCCATCGGCACCACCGCCTCCGGCGCGGCGCTCGCCATGCTGCCGGTCGCCGAGGAAAACAAGAAGGTGCTGATCGTCGAGCCGGCTGTCGCCGACGCCATCACCGGCGAGAAGTGGAATCGCTACATCTTCCGCACCGGCCGCAACTCGTCGCAGGACGCGATTTCCAACGCGGTCGCCATCGGCAAGCAGGGCGTCACCGTCGCCACCCTCGGGCAGGACAACGCCTTCGGCAAGGACGGCGTGGCCGCGTTCAAGGACGCGCTCGCCAAGACCGGCGCCACCCTCGCCGCCGAAGAATATGTCCCCGCCGCAACCACCGACTTCACCGCGGCCGGCCAGCGCCTGTTCGATGCGCTGAAGGACAAGCCGGGCCGCAAGATCATCTGGGTGATCTGGGCCGGCGGCGGAGATCCGCTGACCAAGCTGCAGGACATGGACCCGAAGCGCTACAGCATCGAACTGTCGAGCGGCGGCAACATCCTGCCTGCGCTGGCGGCCTACAAGCGCCTGCCGGGCCTTGAGGGCGCGACCTATTACTACTACGCGATCCCGAAAAACCCGATCAACGAGTGGTTCGTCGCCGAGCACCAGAAGCGCTTCAACGCGCCGCCGGACTTCTTCACCGCGGGCGGTTTCGCGGCGGCCATGGCGGCTGTGACCGCCGTGCAGAAGGCGAAGTCCACCGACACCGAGAAGCTGATCGCGGCGATGGAAGGCATGGAGTTCGACACGCCGAAGGGCAAGATGGTGTTCCGCAAGGAAGATCATCAGGCGCTGCAGAGCATGTATCACTTCAAGGTCAAGGTCGATCCGAACCTGGCCTGGGCCGATAACGAACTGGTCCGCGAACTCAAGATCGAGGACATGCAGATCCCGATCAAGAACAAGCGGTAA
PROTEIN sequence
Length: 394
MRKTVLLTAAAVTLLAMPASADDLKIALIYGKTGPLEAYAKQTETGLRMGLEYATKNTMTVDGRKIVLITKDDQGKPDLAKAALAEAYQDDKVDLAIGTTASGAALAMLPVAEENKKVLIVEPAVADAITGEKWNRYIFRTGRNSSQDAISNAVAIGKQGVTVATLGQDNAFGKDGVAAFKDALAKTGATLAAEEYVPAATTDFTAAGQRLFDALKDKPGRKIIWVIWAGGGDPLTKLQDMDPKRYSIELSSGGNILPALAAYKRLPGLEGATYYYYAIPKNPINEWFVAEHQKRFNAPPDFFTAGGFAAAMAAVTAVQKAKSTDTEKLIAAMEGMEFDTPKGKMVFRKEDHQALQSMYHFKVKVDPNLAWADNELVRELKIEDMQIPIKNKR*