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SCNpilot_expt_1000_bf_scaffold_687_curated

Search features with annotation key words

Displaying items 31-60 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_687_curated_31
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35030..36565)
DNA (1536bp) protein (512aa)
D-galactarate dehydratase/Altronate hydrolase (EC:4.2.1.42); K01708 galactarate dehydratase [EC:4.2.1.42]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PQW6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41925.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_687_curated_32
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36843..37619)
DNA (777bp) protein (259aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:EGP07662.1}; EC=4.1.2.- {ECO:0000313|EMBL:EGP07662.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
HpcH/HpaI aldolase; K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-]
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=2 Tax=Bradyrhizobiaceae RepID=F7QL09_9BRAD
SCNpilot_expt_1000_bf_scaffold_687_curated_33
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37790..38356)
DNA (567bp) protein (189aa)
malate/L-lactate dehydrogenase; K13574 uncharacterized oxidoreductase [EC:1.1.1.-]
YbiC-like oxidoreductase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QL08_9BRAD
YbiC-like oxidoreductase {ECO:0000313|EMBL:EGP07661.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCNpilot_expt_1000_bf_scaffold_687_curated_34
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38311..38883)
DNA (573bp) protein (191aa)
malate/L-lactate dehydrogenase; K13574 uncharacterized oxidoreductase [EC:1.1.1.-]
YbiC-like oxidoreductase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QL08_9BRAD
YbiC-like oxidoreductase {ECO:0000313|EMBL:EGP07661.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCNpilot_expt_1000_bf_scaffold_687_curated_35
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38887..39615)
DNA (729bp) protein (243aa)
ABC transporter ATP-binding protein n=1 Tax=Afipia birgiae RepID=UPI0002FDE129
Uncharacterized protein {ECO:0000313|EMBL:EKS42687.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
high-affinity branched-chain amino acid transport protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_687_curated_36
Beauveria bassiana, Beauveria, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

40792..41478
DNA (687bp) protein (229aa)
Uncharacterized protein {ECO:0000313|EMBL:KGQ02267.1}; TaxID=1245745 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Cordycipitaceae; Beauveria.;" source="Beauveria bassiana D1-5.;"
SCNpilot_expt_1000_bf_scaffold_687_curated_37
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41370..42245)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PQW3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41920.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
inner-membrane translocator
SCNpilot_expt_1000_bf_scaffold_687_curated_38
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42474..43619)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PPE3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42684.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_687_curated_39
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43918..44412
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PWE9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42683.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_687_curated_40
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44580..46925)
DNA (2346bp) protein (782aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PJ71_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42682.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
RND efflux transporter protein
SCNpilot_expt_1000_bf_scaffold_687_curated_41
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47453..48670
DNA (1218bp) protein (406aa)
Polysaccharide biosynthesis protein n=3 Tax=Oligotropha carboxidovorans RepID=B6JIE4_OLICO
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:AEI05736.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_1000_bf_scaffold_687_curated_42
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48717..49757
DNA (1041bp) protein (347aa)
Glycosyl transferase n=2 Tax=Oligotropha carboxidovorans RepID=B6JIE3_OLICO
glycosyl transferase family protein
Glycosyl transferase {ECO:0000313|EMBL:AEI05737.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_1000_bf_scaffold_687_curated_43
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49845..50630
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002FBCC9D
UPF0176 protein HMPREF9695_01008 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
rhodanese-like domain-containing protein; K07146 UPF0176 protein
SCNpilot_expt_1000_bf_scaffold_687_curated_44
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50623..50850
DNA (228bp) protein (76aa)
Protein SlyX homolog n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PQV8_9BRAD
Protein SlyX homolog {ECO:0000256|HAMAP-Rule:MF_00715}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SlyX; K03745 SlyX protein
SCNpilot_expt_1000_bf_scaffold_687_curated_45
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51121..52302
DNA (1182bp) protein (394aa)
ABC transporter permease n=1 Tax=Afipia birgiae RepID=UPI0003160AF4
Uncharacterized protein {ECO:0000313|EMBL:EKS41914.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_687_curated_46
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52476..53243
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PWE2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42678.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_687_curated_47
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53407..54129
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGY3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41912.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_687_curated_48
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54434..55450
DNA (1017bp) protein (339aa)
High-affinity branched-chain amino acid transport system permease n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKZ6_9BRAD
High-affinity branched-chain amino acid transport system permease {ECO:0000313|EMBL:EGP08515.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
SCNpilot_expt_1000_bf_scaffold_687_curated_49
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55447..56508
DNA (1062bp) protein (354aa)
ABC transporter permease protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKZ5_9BRAD
ABC transporter permease protein {ECO:0000313|EMBL:EGP08514.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_expt_1000_bf_scaffold_687_curated_50
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56643..57416)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PU72_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41908.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_687_curated_51
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57626..58915)
DNA (1290bp) protein (430aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI0002E4EE7D
Uncharacterized protein {ECO:0000313|EMBL:EKS41907.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_687_curated_52
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59030..59518)
DNA (489bp) protein (163aa)
phasin n=1 Tax=Afipia birgiae RepID=UPI000378C44B
Phasin {ECO:0000313|EMBL:EKS41906.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
phasin
SCNpilot_expt_1000_bf_scaffold_687_curated_53
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59676..60272)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PQU9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41905.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_687_curated_54
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60269..61363)
DNA (1095bp) protein (365aa)
poly-beta-hydroxybutyrate polymerase (EC:2.3.1.-); K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-] rbh
poly-beta-hydroxybutyrate polymerase n=1 Tax=Afipia birgiae RepID=UPI0002D8618B
Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit {ECO:0000313|EMBL:EKS41904.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_687_curated_55
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61360..61743)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E3741A
Uncharacterized protein {ECO:0000313|EMBL:EKS41903.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_687_curated_56
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61930..62844
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGX4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41902.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hydrolase
SCNpilot_expt_1000_bf_scaffold_687_curated_57
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62851..66090)
DNA (3240bp) protein (1080aa)
P-450/NADPH-P450 reductase; K14338 cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
NADPH--cytochrome P450 reductase n=1 Tax=Afipia birgiae RepID=UPI0003054124
Uncharacterized protein {ECO:0000313|EMBL:EKS41901.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_687_curated_58

Not on your lists

comp(66199..67203)
DNA (1005bp) protein (335aa)
Epoxide hydrolase n=1 Tax=uncultured organism RepID=C3V8M6_9ZZZZ
Epoxide hydrolase {ECO:0000313|EMBL:ACO95125.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
putative epoxide hydrolase
SCNpilot_expt_1000_bf_scaffold_687_curated_59
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67219..68763)
DNA (1545bp) protein (515aa)
acyltransferase n=1 Tax=Afipia birgiae RepID=UPI000362545A
Acyltransferase, WS/DGAT/MGAT {ECO:0000313|EMBL:EKS41899.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_687_curated_60
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68829..69626)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PU64_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41898.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
Displaying items 31-60 of 125 in total

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