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SCNpilot_expt_1000_bf_scaffold_687_curated

Search features with annotation key words

Displaying items 61-90 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_687_curated_61
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69883..72585
DNA (2703bp) protein (901aa)
Putative acetyl-CoA synthetase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKY3_9BRAD
Putative acetyl-CoA synthetase {ECO:0000313|EMBL:EGP08502.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
CoA-binding protein; K09181 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_687_curated_62
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72787..73842)
DNA (1056bp) protein (352aa)
NAD-dependent alcohol dehydrogenase (EC:1.1.1.1); K00001 alcohol dehydrogenase [EC:1.1.1.1]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PK12_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41896.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_687_curated_63
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74055..74957
DNA (903bp) protein (301aa)
LysR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0002E630C8
ModE molybdate transport repressor domain-containing protein {ECO:0000313|EMBL:EKS41895.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_687_curated_64
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74988..75476)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PM84_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41894.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_687_curated_65
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75907..77274)
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000361DAE7
Uncharacterized protein {ECO:0000313|EMBL:EKS41893.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_687_curated_66
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77772..78185
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PM40_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42656.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_687_curated_67
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78190..79329
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PSZ8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42655.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
putative lipid transfer protein
SCNpilot_expt_1000_bf_scaffold_687_curated_68
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79360..80280
DNA (921bp) protein (307aa)
Short-chain alcohol dehydrogenase-like dehydrogenase n=2 Tax=Bradyrhizobiaceae RepID=F7QKX3_9BRAD
Short-chain alcohol dehydrogenase-like dehydrogenase {ECO:0000313|EMBL:EGP08492.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_1000_bf_scaffold_687_curated_69
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80494..81765
DNA (1272bp) protein (424aa)
Prolidase {ECO:0000313|EMBL:EGP08491.1}; EC=3.4.13.9 {ECO:0000313|EMBL:EGP08491.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Prolidase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKX2_9BRAD
amidohydrolase
SCNpilot_expt_1000_bf_scaffold_687_curated_70
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81769..84216)
DNA (2448bp) protein (816aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
PEP carboxylase; K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31]
phosphoenolpyruvate carboxylase n=1 Tax=Afipia birgiae RepID=UPI0002E9D0E4
SCNpilot_expt_1000_bf_scaffold_687_curated_71
unknown

Not on your lists

84305..84517
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_687_curated_72
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84615..86165)
DNA (1551bp) protein (517aa)
long-chain-fatty-acid--CoA ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PQT2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41885.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_687_curated_73
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86178..86666)
DNA (489bp) protein (163aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase n=2 Tax=Bradyrhizobiaceae RepID=F7QKW8_9BRAD
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EGP08487.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCNpilot_expt_1000_bf_scaffold_687_curated_74
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87088..87960
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PU50_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41883.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_1000_bf_scaffold_687_curated_75
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88036..89265
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGV6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41882.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
extracellular ligand-binding receptor
SCNpilot_expt_1000_bf_scaffold_687_curated_76
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89369..90790
DNA (1422bp) protein (474aa)
amidase; K01426 amidase [EC:3.5.1.4]
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PM30_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42646.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_687_curated_77
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90914..92209
DNA (1296bp) protein (432aa)
O-acetylhomoserine sulfhydrylase/ O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:EGP08483.1}; EC=2.5.1.48 {ECO:0000313|EMBL:EGP08483.1};; EC=2.5.1.49 {ECO:0000313|EMBL:EGP08483.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
O-acetylhomoserine aminocarboxypropyltransferase; K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
O-acetylhomoserine sulfhydrylase/ O-succinylhomoserine sulfhydrylase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKW4_9BRAD
SCNpilot_expt_1000_bf_scaffold_687_curated_78
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92213..93019
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PP97_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42644.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_687_curated_79
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93023..94282)
DNA (1260bp) protein (420aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
Glutamate dehydrogenase n=2 Tax=Bradyrhizobiaceae RepID=F7QKW2_9BRAD
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_687_curated_80
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94451..95158)
DNA (708bp) protein (236aa)
Branched-chain amino acid transport ATP-binding protein n=2 Tax=Bradyrhizobiaceae RepID=F7QKW1_9BRAD
Branched-chain amino acid transport ATP-binding protein {ECO:0000313|EMBL:EGP08480.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_687_curated_81
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95148..95882)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGV1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41877.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_687_curated_82
unknown

Not on your lists

96106..96927
DNA (822bp) protein (274aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_687_curated_83
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96867..97745)
DNA (879bp) protein (293aa)
High-affinity branched-chain amino acid transport system permease n=2 Tax=Bradyrhizobiaceae RepID=F7QKV8_9BRAD
High-affinity branched-chain amino acid transport system permease {ECO:0000313|EMBL:EGP08477.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_expt_1000_bf_scaffold_687_curated_84
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97858..99105)
DNA (1248bp) protein (416aa)
High-affinity leucine-specific transport system, periplasmic binding protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKV7_9BRAD
High-affinity leucine-specific transport system, periplasmic binding protein {ECO:0000313|EMBL:EGP08476.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_687_curated_85
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99163..99987)
DNA (825bp) protein (275aa)
UPF0317 protein HMPREF9695_00965 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PU43_9BRAD
UPF0317 protein HMPREF9695_00965 {ECO:0000256|HAMAP-Rule:MF_01830}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_687_curated_86
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100102..101064
DNA (963bp) protein (321aa)
LysR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI000371DDF3
Uncharacterized protein {ECO:0000313|EMBL:EKS41872.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
LysR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_687_curated_87
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101018..101272)
DNA (255bp) protein (85aa)
catalase n=1 Tax=Afipia birgiae RepID=UPI0002DFC54E
Uncharacterized protein {ECO:0000313|EMBL:EKS41871.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_687_curated_88
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101464..102222
DNA (759bp) protein (253aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8PP85_9BRAD
Putative integral membrane protein {ECO:0000313|EMBL:EGP08472.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein; K07090
SCNpilot_expt_1000_bf_scaffold_687_curated_89
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102219..103058)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PW77_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42633.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
aldo/keto reductase
SCNpilot_expt_1000_bf_scaffold_687_curated_90
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103071..104159)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAP3_9BRAD
Putative secreted hydrolase {ECO:0000313|EMBL:CEG09846.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
Displaying items 61-90 of 125 in total

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