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SCNpilot_expt_1000_bf_scaffold_687_curated_86

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 100102..101064

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI000371DDF3 similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 313.0
  • Bit_score: 510
  • Evalue 1.20e-141
Uncharacterized protein {ECO:0000313|EMBL:EKS41872.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 320.0
  • Bit_score: 507
  • Evalue 1.90e-140
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 305.0
  • Bit_score: 435
  • Evalue 1.60e-119

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGATCGATTTCAAATCAATCGAGACGTTTCTCTGGGTGGTGACGCTCGGCAGCTTCGGCGGCGCGGCGCGCAAGCTCAACACCACGCAGCCCGCGATCTCGCAGCGGATTGCGCAACTCGAAATGGAACTCGGTGTGAAGCTGTTGCAGCGTGACAGCCGCAACGTGACGCCGACACCGAGCGGACGGCAGATGCTGCAATATGCCGAGAAGCTGATCGGCCTGCGTTCAGAAATGCTGGCTGCGGTGATGGAACGCTCGGCGATGCGCGGCGTCATTCGTCTCGGCGTCTCCGAAACCATCGTGCATACATGGCTGCCACGACTGATCGAACAGGTCGCGAGTGCACATCCCAACCTCTCGCTTGAAGTCGAAGTCGACATCACGCCCAACCTGCGCGCGCGCCTTCTTTCGCAGGAGATCGATCTCGCCTTCTGCCTCGGCCCATGGTCGGAATCGAACGTGCGCAACCGCGTGCTGTGCGACTATCCGAATTCGTTTGTCGCCAGCCCCTCGCTCGGCCTGCCCGAGGGCGTGCTGACCGCACATGATCTCGCGCGCTTTGCGATCATCACCTTTCCGCGCAAGACGCAGCCCTATGAAATCGTGCGCTCGCTGTTCAACCAGCCCGATCTGCCTTCGATCCGGCTGCATGCCAGCGCGTCGCTCGCCACCGTGATCCGCATGGCGACCGACGGCCTCGGCGTCGCCGTGATCCCGACCGCCATTGTCGAGCGCGAGCTGGCGGAAGGGCAACTCAACCTTCTCACCACCGATATGCAGGTGCCGTCGCTGACCTTCTCCGCGAGCTGGCTCGCATCACCGGATACGCTGGCCGCGGAGCGTGTCGCCGATTTCGCCGCGAAGCTCGCCCAGGGCGATGCAAACTCGGCAACGCCCGTTCAGCCGCTCAAGCTCAATGCTGCGACGGCGGTTCGTCGGGGAACTCGAGCGCCTCGGTAA
PROTEIN sequence
Length: 321
MIDFKSIETFLWVVTLGSFGGAARKLNTTQPAISQRIAQLEMELGVKLLQRDSRNVTPTPSGRQMLQYAEKLIGLRSEMLAAVMERSAMRGVIRLGVSETIVHTWLPRLIEQVASAHPNLSLEVEVDITPNLRARLLSQEIDLAFCLGPWSESNVRNRVLCDYPNSFVASPSLGLPEGVLTAHDLARFAIITFPRKTQPYEIVRSLFNQPDLPSIRLHASASLATVIRMATDGLGVAVIPTAIVERELAEGQLNLLTTDMQVPSLTFSASWLASPDTLAAERVADFAAKLAQGDANSATPVQPLKLNAATAVRRGTRAPR*