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SCNpilot_expt_1000_bf_scaffold_3015_curated_11

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 10808..11251

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S6 n=1 Tax=Afipia birgiae RepID=UPI0002D6F932 similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 158.0
  • Bit_score: 280
  • Evalue 1.20e-72
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 155.0
  • Bit_score: 278
  • Evalue 5.00e-72
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 159.0
  • Bit_score: 252
  • Evalue 8.60e-65

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Taxonomy

Bradyrhizobiaceae bacterium SG-6C → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGCCTCTTTACGAGCATGTATTTCTCGCGCGTCAGGACGCGAGCGCCCAGCAGGTCGAAGACTTCACCACCCAGATCACCGGCGTGATCGAAGGTCTCGGCGGCAAGGTCACCAAGACCGAGAACTGGGGCGTGCGCTCTCTCACCTACCGCATGAACAAGAACCGCAAGGCTCACTTCATGATGCTCAACATCGACGGCCCCGCAGCGGTGGTCGCCGAGATCGAGCGGCAGGAACGCATCAACGAAGATATCATCCGCTATCTCACCGTCCGCGTCGAAGAGCTGGAGGAAGGCCCCTCCGCGATGATGCGCAAGTCCGAGCGTGACCGCGACGAGCGTGGCGGCGGTTTCCGTGGCGACCGTGAAGGCGGTGGCTTCCGTGGTGATCGTGGTCCGCGCCGTCCGCGCGACGAAGACGCAACTGCAGCGGTTGAGGAGTAA
PROTEIN sequence
Length: 148
MPLYEHVFLARQDASAQQVEDFTTQITGVIEGLGGKVTKTENWGVRSLTYRMNKNRKAHFMMLNIDGPAAVVAEIERQERINEDIIRYLTVRVEELEEGPSAMMRKSERDRDERGGGFRGDREGGGFRGDRGPRRPRDEDATAAVEE*