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SCNpilot_expt_1000_bf_scaffold_3015_curated_12

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 11257..11496

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=4 Tax=Bradyrhizobiaceae RepID=RS18_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 159
  • Evalue 1.70e-36
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 159
  • Evalue 5.40e-37
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 159
  • Evalue 2.40e-36

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGGCTGAAGCAGGTGCACGCCGTCCGTTCTTCCGTCGCCGCAAGACCTGCCCGTTCACGGGCCCGAACGCGCCGAAGATCGACTACAAGGATTCCAAGCTGCTGATGCGTTACGTGTCCGAGCGCGGCAAGATTGTGCCGAGCCGCATCACCGCGGTGTCGGCCAAGAAGCAGCGTGAACTCGCCCGCGCCATCAAGCGCTCGCGGTTCCTGGGTCTGCTGCCTTACGTGATCCGCTAA
PROTEIN sequence
Length: 80
MAEAGARRPFFRRRKTCPFTGPNAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAIKRSRFLGLLPYVIR*