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SCNpilot_expt_1000_bf_scaffold_3015_curated_20

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(19571..19945)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030BA837 similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 122.0
  • Bit_score: 231
  • Evalue 4.20e-58
Uncharacterized protein {ECO:0000313|EMBL:EKS39579.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 122.0
  • Bit_score: 228
  • Evalue 3.80e-57
NHL repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 123.0
  • Bit_score: 217
  • Evalue 2.60e-54

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
GTGCGTATCGCGAAGGACGGCCTGGTCTATGTGTGCGACCGTCAGAATGATCGCATTCAGGTATTCAAGAAGGACGGCACCTTCGTGAAGGAGATGTTCGTCGAAAAGAACACGCTGGCGAACGGCTCGATCTGGGATCTGGAAATCTGGAACGATCCGAAGCAGACATTCCTGCTCAATGCCGACGGCGCCAACAACGAGGTGCGCATCCTCAAGCGCGACACCGGCGACATCGTCGGACGGTTCGGCCGCAACGGCCGCATGGCCGGCGATTTCCACTGGGTCCACAATCTGGCGCTGGATTCGAAGGGCAATGTCTATACGACCGAGGTCGACAGCGGAAAACGCGCGCAGCGTTTCGTGGTGAAGAAGTAA
PROTEIN sequence
Length: 125
VRIAKDGLVYVCDRQNDRIQVFKKDGTFVKEMFVEKNTLANGSIWDLEIWNDPKQTFLLNADGANNEVRILKRDTGDIVGRFGRNGRMAGDFHWVHNLALDSKGNVYTTEVDSGKRAQRFVVKK*