ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3015_curated_21

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 20906..22348

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RadA n=1 Tax=Afipia birgiae RepID=UPI0002E46D24 similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 480.0
  • Bit_score: 821
  • Evalue 6.30e-235
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 473.0
  • Bit_score: 816
  • Evalue 1.70e-233
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 489.0
  • Bit_score: 789
  • Evalue 6.40e-226

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
ATGGCGCGCGCGGCGGTTCTTTCTTTCGTCTGCCAGAATTGCGGCGCGGCCTACAACAAGTGGCAGGGCAAGTGCGAGTCCTGCGGCGAGTGGAATACGCTGTCGCAGGACGATCCGACCGGCGCGGCGTCGGTCCCCGCCAACCTGCGCGCCAAGCGCCGCGGCCGCCTGTTCACCCTTGAAACCCTCACCGGCGCGAGTCCGGAGCCGCCGCGTCTCTCGTCTGGCATGGCGGAACTCGATCGCGTCACCGGCGGAGGCTTCGTGCGCGGTTCAGTGCTGCTGATGGCGGGTGACCCCGGCATCGGCAAATCCACCCTGCTCACGCAGGCCACCAGCATGCTGGCGCGGAACGGGCACCGCGTCGTCTATATCTCCGGCGAAGAAGCCGTCGGACAGGTGCGGCTGCGCGCGGCGCGCCTCGGCCTTGCAAACGCCGCCGTCGAGCTTGCGGCCGAAACCTCGGTCGAAGATATCATCGCCACGCTGTCGGAAGGCAAGCCGCCTCGTCTTGTGGTCATCGACTCGATCCAGACCATGTGGACCGACACCGTGGAATCCGCGCCCGGCACCGTGACGCAGGTTCGCGCCTCGGCACAGGCGCTCATTCGTTTCGCCAAGAAATCCGGCGCGGCGCTGATCCTTGTCGGCCATGTCACCAAGGACGGCCAGATCGCGGGACCGCGCGTGGTCGAACACATGGTCGATGCCGTGATGAGTTTCGAGGGCGAAGGCTCGCAGCAGTTCCGCATCCTGCGCGCGGTGAAGAACCGTTTCGGCCCCACCGACGAGATCGGCGTGTTCGAGATGACGGGCCTCGGCCTGCGCGAAGTCACCAATCCGTCCGAACTGTTCCTGTCCGAACGCGATCTCGGCAGCCCCGGTACCGCCGTGTTCGCCGGGATCGAGGGCACCCGCCCCGTGCTGGTGGAACTGCAGGCGCTGGTTGCGCCCACCACTCTTGGCACGCCGCGACGCGCGGTGGTCGGCTGGGATTCAAGCCGGCTATCGATGGTGCTGGCGGTGCTGGAGGCCCATTGCGGGGTCAAGCTCTCCGGCTATGACGTCTATTTCAATGTCGCCGGCGGCCTGCGCATCAATGAACCGGCCGCCGACCTCGCCGCAGCGGCGGCGCTGGTGTCGTCGCTGGCGAACGCGCCCCTGCCGGTCGATGCGGTCTATTTCGGCGAAATCTCGCTGTCGGGCGCGGTGCGGCCGGTCGCGCAGACCTCGGCGCGCCTCAAGGAAACCGCCAAGCTCGGCTTCGGCCGCGCCGGTCTCCCGGAAACCACACGTGGCGATACAGGAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATCGCTGACCTCTCTGGTGGCCGACATCGCAGCGAAGGGCCGCAAAGCCACAACTTCAGGAAAATCCGCTTCGAACGCCGGATTCCGGCCCGACAACGGCTAA
PROTEIN sequence
Length: 481
MARAAVLSFVCQNCGAAYNKWQGKCESCGEWNTLSQDDPTGAASVPANLRAKRRGRLFTLETLTGASPEPPRLSSGMAELDRVTGGGFVRGSVLLMAGDPGIGKSTLLTQATSMLARNGHRVVYISGEEAVGQVRLRAARLGLANAAVELAAETSVEDIIATLSEGKPPRLVVIDSIQTMWTDTVESAPGTVTQVRASAQALIRFAKKSGAALILVGHVTKDGQIAGPRVVEHMVDAVMSFEGEGSQQFRILRAVKNRFGPTDEIGVFEMTGLGLREVTNPSELFLSERDLGSPGTAVFAGIEGTRPVLVELQALVAPTTLGTPRRAVVGWDSSRLSMVLAVLEAHCGVKLSGYDVYFNVAGGLRINEPAADLAAAAALVSSLANAPLPVDAVYFGEISLSGAVRPVAQTSARLKETAKLGFGRAGLPETTRGDTGGXXXXXXXXXGSLTSLVADIAAKGRKATTSGKSASNAGFRPDNG*