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SCNpilot_expt_1000_bf_scaffold_1714_curated_31

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(31090..31674)

Top 3 Functional Annotations

Value Algorithm Source
pcaG; protocatechuate 3,4-dioxygenase subunit alpha; K00448 protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 194.0
  • Bit_score: 272
  • Evalue 1.10e-70
protocatechuate 3,4-dioxygenase subunit alpha n=1 Tax=Afipia birgiae RepID=UPI00031D090B similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 195.0
  • Bit_score: 324
  • Evalue 7.50e-86
Protocatechuate 3,4-dioxygenase, alpha subunit {ECO:0000313|EMBL:EKS35750.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 195.0
  • Bit_score: 318
  • Evalue 5.80e-84

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGAGCGGCATCACTCCATCACAGACTGTCGGCCCTTACTTCAAGTACGGATTGACGCCGGGCAGCGACTATCAGTGGAACGACGCTTTCGGCAACGATCTGGTGACGCCTGAGGTCTCCGGTGAGCGTATCCGCATCGTTGGCCGCATTTTCGACGGCGACGGCAAGGAAGTCCCCGACTCGATGCTGGAAATCTGGCAAGCGGATTCCCGGGGCCGTTTCGCCGATCCGCAGGATGCGCGTTCGATCCCGAATGCCGCGTTCAGGGGGTTCGGCCGTTGCGGAACCGATAACAACGGTGTCTATTCATTTCACACGATCAAGCCGGGACCGGTTGCGGGACCGCATGAGCTGCAGGCGCCGCATATCCTGCTTGCGGTCTTTGCGCGGGGCATGACCCAACAGGCGCAGACCCGGATCTATTTCGAGCACGAGCCTGCGAATGCCACAGATCCCATTCTTGCGCTGGTTCCCGAGGAGCGCCGCGCGACATTAATCGCGATCCGGGAGCCGGGAGACGTTGCGACCTATCGCTTCGATGTTCATCTGCAAGGCGATCTGGAGACGGTGTTCTTCGATCTGTAA
PROTEIN sequence
Length: 195
MSGITPSQTVGPYFKYGLTPGSDYQWNDAFGNDLVTPEVSGERIRIVGRIFDGDGKEVPDSMLEIWQADSRGRFADPQDARSIPNAAFRGFGRCGTDNNGVYSFHTIKPGPVAGPHELQAPHILLAVFARGMTQQAQTRIYFEHEPANATDPILALVPEERRATLIAIREPGDVATYRFDVHLQGDLETVFFDL*