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SCNpilot_expt_1000_bf_scaffold_1714_curated_32

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(31674..32375)

Top 3 Functional Annotations

Value Algorithm Source
protocatechuate 3,4-dioxygenase subunit beta; K00449 protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 232.0
  • Bit_score: 414
  • Evalue 2.70e-113
Protocatechuate 3,4-dioxygenase, beta subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PA67_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 233.0
  • Bit_score: 468
  • Evalue 2.90e-129
Protocatechuate 3,4-dioxygenase, beta subunit {ECO:0000313|EMBL:EKS36505.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 233.0
  • Bit_score: 468
  • Evalue 4.10e-129

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGCCCCTTATCTATCCACGCGAAAGCAATGCTGCGCATGCGCCGCGGCTGTCACCGGATTACAAGAGCACGGTGAAGCGTTCGCCGATCAAGCCGCTCATCATCATGCCGCATACGCTGTCCGAACTGACGGGACCGGTTTACGGTCACGAAACCGTGCGTGAGAACGACCACGATCTCACGGCGCAGCATCAGGGCGAACCGCTTGGCGAGCGGATCATCGTTCATGGACATGTCCGAGACGAGGACGGCAGGGGCGTGCCCAATTCTCTGGTGGAGGTCTGGCAGGCCAACGCCTGCGGACGCTACGTCCACGTGGTCGACCAGCATCCGGCACCGCTTGATCCCAATTTTACCGGGGCGGGGCGCGCCAAGACCGATGCCAACGGCTATTACAGGTTCATCACCATCAAGCCGGGCGCATATCCGTGGGGCAATCATCCGAACGCCTGGCGGCCGGCGCACATCCATTTCTCGCTGTTCGGCCATTCGTTCATCTCGCGCATCGTCACGCAGATGTATTTCCCGGGCGACCCGCTGTTTGCCTACGACCCGATCTTCAATTCGGTCACCGACGAAAAGGCGCGAATGCGCATGGTTTCGAGTTTCGATCTCGAAAATACGAAGCCCGACTGGGCTCTCTGCTATCGCTTCGACATCGTCCTGCGCGGACGCAACGCCACACCTTTGGATAACGACTGA
PROTEIN sequence
Length: 234
MPLIYPRESNAAHAPRLSPDYKSTVKRSPIKPLIIMPHTLSELTGPVYGHETVRENDHDLTAQHQGEPLGERIIVHGHVRDEDGRGVPNSLVEVWQANACGRYVHVVDQHPAPLDPNFTGAGRAKTDANGYYRFITIKPGAYPWGNHPNAWRPAHIHFSLFGHSFISRIVTQMYFPGDPLFAYDPIFNSVTDEKARMRMVSSFDLENTKPDWALCYRFDIVLRGRNATPLDND*