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SCNpilot_expt_1000_bf_scaffold_1153_curated_16

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(15489..16568)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 327.0
  • Bit_score: 588
  • Evalue 7.20e-165
hypothetical protein; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 330.0
  • Bit_score: 527
  • Evalue 2.60e-147
Pseudouridine synthase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7S8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 327.0
  • Bit_score: 588
  • Evalue 5.10e-165

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGCAACAATCTCCCCGCGGCCCGGCTTCTGACGAGCCTGCCGATGCGAACGACACTGACATTTCCGAAGGCCATGCTTCCAAAGGCCATGGCGAGCGCCGCGAACTGACGCTGGCCGCCGGCGAGCCGCGCACGCGGCTGGACCGCGCGCTGGCGGCGCGCAGCCCCGACCTGTCGCGTTCGCGCCTCAAGGCGCTCATTCTCGCGGGCCAGGTGAGCATCGGCGGCGCGCCGGTTCGCGACCCCGCCCACCATGTCGCCGCCGGAGATACGATCACAATCGACGTGCCGCCCGCCGTTCCGGCCGAGCCCGAAGGCGAGGACATTCCGCTTAATATCGTATTCGAGGACGACGACATCATCGTGCTCGACAAGCCGAAGGACCTCGTGGTGCATCCCGCCGCCGGGCACGAGAGCGGCACACTGGTCAACGCGCTGATCGCCCATTGCGGAGCCTCGCTTTCCGGGATCGGCGGGGTGAAGCGCCCCGGCATCGTCCATCGCCTCGACAAGGACACCACCGGGCTGATGGTGGTGGCCAAGAACGACCGCGCCCATCAGTCGTTGTCCGCGCAGTTCGCCGACCACGGCCGCACCGGGGCAATGCGGCGCGGTTACATGGCCTTCGCCTGGGGCGCGCCCGGCCGCAAAAGCGGCACCATCGACCAGCCGATCGACCGCCATCCGCACGCCCGGGAGAAGATGGCGGTGCGGCAGGGCGGCCGCGAGGCCATCACCCACTGGGACGCGCTGGAATCCTTCACCGGCCTCGACGGCAAGCCGGTCGCCTCCCTGCTCGCCTGCCAGCTCGAGACCGGGCGCACGCATCAGATCCGCGTTCATCTCGCCCATCTCGGCCATCCGCTGATGGGCGACGATGTCTATGGCGCCGGTTTCCGGACCAAGGCCCGGCAGCTCGGCCCGCAGGCCCAATCCGCGCTCGTTGCCCTTGGACGGCAGGCCCTCCATGCCTATCTGCTGGTGATCGAACACCCGGTGAGCGGAGAAATTCTGCACTGGGAGTCGCCCCTGCCGGAGGATTTGGTTCTGCTTGAGGCAGCCCTCCGTAGAACAGACTGA
PROTEIN sequence
Length: 360
MQQSPRGPASDEPADANDTDISEGHASKGHGERRELTLAAGEPRTRLDRALAARSPDLSRSRLKALILAGQVSIGGAPVRDPAHHVAAGDTITIDVPPAVPAEPEGEDIPLNIVFEDDDIIVLDKPKDLVVHPAAGHESGTLVNALIAHCGASLSGIGGVKRPGIVHRLDKDTTGLMVVAKNDRAHQSLSAQFADHGRTGAMRRGYMAFAWGAPGRKSGTIDQPIDRHPHAREKMAVRQGGREAITHWDALESFTGLDGKPVASLLACQLETGRTHQIRVHLAHLGHPLMGDDVYGAGFRTKARQLGPQAQSALVALGRQALHAYLLVIEHPVSGEILHWESPLPEDLVLLEAALRRTD*