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SCNpilot_expt_1000_bf_scaffold_1153_curated_76

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 81343..83376

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome b n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PS63_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 693.0
  • Bit_score: 1251
  • Evalue 0.0
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 693.0
  • Bit_score: 1251
  • Evalue 0.0
cytochrome B/c1; K00410 ubiquinol-cytochrome c reductase cytochrome b/c1 subunit similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 691.0
  • Bit_score: 1175
  • Evalue 0.0

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2034
ATGAGTGGACCATCCAACTACAACCCGCAAAACCCAGTTCTGAAATGGGTCGAGCAGCGTCTCCCGATTGGGGGACTGATCCACTCGTCATTCGTCGCTTATCCGACGCCGCGTAACCTGAACTACTGGTGGACGTTCGGCGCGATCCTCTCGATGATGCTCGGCGTGCAGATCATCACCGGCATCATCCTGGCGATGCACTACACGCCGCATGTCGATCTGGCCTTCAAGTCGGTCGAACTGATCGTTCGTGACGTCAACTACGGCTGGCTGCTGCGCTACCTGCATTCCAACGGCGCGTCGATGTTCTTCATCGCCGTCTACATCCACATGCTCCGCGGTCTCTACTACGGCTCGTACAAGGCGCCGCGCGAGGTGCTCTGGATTCTCGGCGTCATCATCTACCTGTTGATGATGGCCACGGGCTTCATGGGCTACGTGCTGCCGTGGGGCCAGATGAGCTTCTGGGGCGCGACCGTCATCACCAACCTGTTCGGCGCTATTCCCTACGTCGGCGACAGCATCGTGACCCTGCTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTCGTACTGCACGTCTGGGCGCTGCATGTCGTCGGCCAGAACAATCCGGCCGGCGTCGAGCCGAAGACCGAGAAGGATACCGTTCCGTTCACGCCTTACGCCACCGTCAAGGACGCGTTCGGCATGACCGTGTTCATGCTGTTCTTTGCCTGGTTCATTTTCTACATCCCGAACTATCTCGGCGATCCGGACAACTACATCCCGGCCAACCCGGCCGTGACGCCTGCGCATATCGTGCCGGAATGGTACTACCTGCCGTTCTACGCGATCCTGCGCTCGATCCCGAACAAGCTCGCGGGTGTCATCGCAATGTTCTCGGCGATCATCGTGCTGGCGTTCCTGCCCTGGCTGGACAGCGCCAAAACCCGTTCGTCGAAGTATCGTCCGATGGCCAAGCAGTTCTTCTGGATCTTCGTCGCGGTTTGCCTCGGCCTCGGCTATCTCGGCGCGCAGCCGCCGGAAGGCATCTACGTGATCGCCGGCCGCGTGCTGACGGTGGCGTACTTCGCCTACTTCCTGATCGTGCTGCCGCTCCTGAGCCGCATCGAGAAGGCGCGTCCGCTGCCGAACTCCATCGCGGAAGACGTGCTGCGCAAGACCGGTTCGACCAAGACTCCGATGGTTTCGACCTTGATCGCACTCGCGGTCGGCGCTTCGCTGATGCTGGGCGGCATGAACAATGCGAAGGCTGAAGAAGGCCATGGCCCGACACCGCCGTCGCTGAAGTGGTCGTTCGCAGGTCCGCTCGGCAAGTTCGATCAGGGCCAGCTCCAGCGCGGCCTCAAGGTCTACAAGGAGGTTTGCTCCTCCTGTCATTCGCTGAATTACGTCGCGTTCCGCAATCTTGCCGATCCGGGTGGTCCGGGCTACTCGACTGCCCAGGCTGCGGCCTTGGCTTCCGAGTACAAGATCAAGGACGGTCCGAACGATGCCGGCGACATGTTCGAGCGCAATGGCCGCCCGGCTGATTACTTCCCGGCGCCGTTCCCGAACGAGCAGGCCGCGCGTGCGTCCAACGGCGGTGCGGCTCCGCCGGACCTGTCGCTGATCGCGAAGGCGCGCGGCTATGAACGCGGCTTCCCGCAGTTCATCTTCGATGCCTTCATGCAGTTCCAGGAAAAGGGTCCGAACTACATCGACGCCCTGATGCAGGGCTACGAGGAAAATCCGCCGGCCGGCTTCCAGCTCCCGCAGGGCTCGTACTACAACAAGTACTTCCCGGGTCACGCCATCAAGATGCCGAAGCCGCTCAGCGACGGCCAGGTGACGTATGACGACGGTTCGCCGGCCACGGTGCAGCAGTATGCCAAGGACGTCGCTGCCTTCCTGATGTGGGCTGCGGAGCCTCACCTCGAAGCGCGCAAGCGCACCGGCCTGCAGGTCATGATCTTCCTGCTGGTGCTCTCGGGCCTTCTGTACTTCACCAAGAAGAAGGTCTGGTCGGACGCGCACTAA
PROTEIN sequence
Length: 678
MSGPSNYNPQNPVLKWVEQRLPIGGLIHSSFVAYPTPRNLNYWWTFGAILSMMLGVQIITGIILAMHYTPHVDLAFKSVELIVRDVNYGWLLRYLHSNGASMFFIAVYIHMLRGLYYGSYKAPREVLWILGVIIYLLMMATGFMGYVLPWGQMSFWGATVITNLFGAIPYVGDSIVTLLXXXXXXXXXXXXXXVVLHVWALHVVGQNNPAGVEPKTEKDTVPFTPYATVKDAFGMTVFMLFFAWFIFYIPNYLGDPDNYIPANPAVTPAHIVPEWYYLPFYAILRSIPNKLAGVIAMFSAIIVLAFLPWLDSAKTRSSKYRPMAKQFFWIFVAVCLGLGYLGAQPPEGIYVIAGRVLTVAYFAYFLIVLPLLSRIEKARPLPNSIAEDVLRKTGSTKTPMVSTLIALAVGASLMLGGMNNAKAEEGHGPTPPSLKWSFAGPLGKFDQGQLQRGLKVYKEVCSSCHSLNYVAFRNLADPGGPGYSTAQAAALASEYKIKDGPNDAGDMFERNGRPADYFPAPFPNEQAARASNGGAAPPDLSLIAKARGYERGFPQFIFDAFMQFQEKGPNYIDALMQGYEENPPAGFQLPQGSYYNKYFPGHAIKMPKPLSDGQVTYDDGSPATVQQYAKDVAAFLMWAAEPHLEARKRTGLQVMIFLLVLSGLLYFTKKKVWSDAH*