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SCNpilot_expt_1000_bf_scaffold_1153_curated

Search features with annotation key words

Displaying items 61-90 of 166 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1153_curated_61
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64178..66535)
DNA (2358bp) protein (786aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PK57_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41169.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
TonB-dependent receptor protein; K02014 iron complex outermembrane recepter protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_62
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66631..67020)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNT5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41170.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_63
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67157..67951)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NUL4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32826.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_64
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67948..69207)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEV4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41172.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_65
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69209..72058)
DNA (2850bp) protein (950aa)
LytTR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI000382C15C
N-terminal double-transmembrane domain-containing protein {ECO:0000313|EMBL:EKS41173.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
double-transmembrane region-like protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_66
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72969..73973)
DNA (1005bp) protein (335aa)
ATPase AAA; K03924 MoxR-like ATPase [EC:3.6.3.-]
ATPase AAA n=1 Tax=Afipia birgiae RepID=UPI000367B7E7
Uncharacterized protein {ECO:0000313|EMBL:EKS41175.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1153_curated_67
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74216..74824
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZJ8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32830.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein; K09986 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_68
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74841..75527
DNA (687bp) protein (229aa)
Putative nudix hydrolase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJH0_9BRAD
Putative nudix hydrolase {ECO:0000313|EMBL:EGP08695.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
NUDIX hydrolase rbh
SCNpilot_expt_1000_bf_scaffold_1153_curated_69
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75524..75787
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PS51_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41178.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_70
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75784..77058
DNA (1275bp) protein (425aa)
poly(A) polymerase n=1 Tax=Afipia birgiae RepID=UPI000319B7D4
Uncharacterized protein {ECO:0000313|EMBL:EKS41179.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
polynucleotide adenylyltransferase
SCNpilot_expt_1000_bf_scaffold_1153_curated_71
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77117..77386)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NWH2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32834.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_72
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77530..78864)
DNA (1335bp) protein (445aa)
Putative outer membrane protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRK8_NITHX
outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:ABE61139.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_1000_bf_scaffold_1153_curated_73
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79010..79903)
DNA (894bp) protein (298aa)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hemF; coproporphyrinogen III oxidase; K00228 coproporphyrinogen III oxidase [EC:1.3.3.3]
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PS56_9BRAD
SCNpilot_expt_1000_bf_scaffold_1153_curated_74
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80003..80488)
DNA (486bp) protein (162aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
tRNA/rRNA methyltransferase; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
tRNA methyltransferase n=1 Tax=Afipia birgiae RepID=UPI0002D73388
SCNpilot_expt_1000_bf_scaffold_1153_curated_75
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80765..81292
DNA (528bp) protein (176aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
petA; ubiquinol-cytochrome c reductase iron-sulfur subunit PetA (EC:1.10.2.2); K00411 ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2]
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEX5_9BRAD
SCNpilot_expt_1000_bf_scaffold_1153_curated_76
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81343..83376
DNA (2034bp) protein (678aa)
Cytochrome b n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PS63_9BRAD
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cytochrome B/c1; K00410 ubiquinol-cytochrome c reductase cytochrome b/c1 subunit
SCNpilot_expt_1000_bf_scaffold_1153_curated_77
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83458..83955)
DNA (498bp) protein (166aa)
YbhB and YbcL n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WT54_9BRAD
YbhB and YbcL {ECO:0000313|EMBL:EAQ36586.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
YbhB and YbcL; K06910
SCNpilot_expt_1000_bf_scaffold_1153_curated_78
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84677..86836
DNA (2160bp) protein (720aa)
anthranilate synthase component I and II; K13503 anthranilate synthase [EC:4.1.3.27]
Anthranilate synthase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NR61_9BRAD
Anthranilate synthase {ECO:0000313|EMBL:EKS32847.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_1153_curated_79
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86868..87407
DNA (540bp) protein (180aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
apt; adenine phosphoribosyltransferase Apt (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7]
Adenine phosphoribosyltransferase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NIW2_AFIFE
SCNpilot_expt_1000_bf_scaffold_1153_curated_80
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87418..88218
DNA (801bp) protein (267aa)
3-oxoacyl-(Acyl-carrier protein) reductase {ECO:0000313|EMBL:EGP08713.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EGP08713.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
short-chain dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI00030CB0FE
short chain dehydrogenase
SCNpilot_expt_1000_bf_scaffold_1153_curated_81
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88223..88891)
DNA (669bp) protein (223aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NZL2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32850.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_82
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88913..89680)
DNA (768bp) protein (256aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NUN6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32851.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_83
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89822..91024)
DNA (1203bp) protein (401aa)
htpX; putative protease HtpX; K03799 heat shock protein HtpX [EC:3.4.24.-]
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NR66_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32852.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_1153_curated_84
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91067..91627)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P362_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32853.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
LemA; K03744 LemA protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_85
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91828..92208)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NWJ1_9BRAD
Putative lipoprotein {ECO:0000313|EMBL:EGP08718.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_86
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92280..93272)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZL6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32855.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_87
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93377..93700)
DNA (324bp) protein (108aa)
Chromosome partition protein Smc n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNX2_9BRAD
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
smc; chromosome partition protein Smc; K03529 chromosome segregation protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_88
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93667..96831)
DNA (3165bp) protein (1055aa)
Chromosome partition protein Smc n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNX2_9BRAD
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
chromosome segregation protein; K03529 chromosome segregation protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_89
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97082..97738)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NR70_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32857.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
putative oxidoreductase
SCNpilot_expt_1000_bf_scaffold_1153_curated_90
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97858..98337)
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8P367_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP08723.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
Displaying items 61-90 of 166 in total

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