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SCNpilot_expt_1000_bf_scaffold_1153_curated

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Displaying items 151-166 of 166 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1153_curated_151
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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159247..160461
DNA (1215bp) protein (405aa)
acyl-CoA dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002D6A932
Uncharacterized protein {ECO:0000313|EMBL:EKS41275.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
glutaryl-CoA dehydrogenase
SCNpilot_expt_1000_bf_scaffold_1153_curated_152
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160489..161418
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PID9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41276.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
metallo-beta-lactamase superfamily protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_153
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161391..162239)
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJR7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41277.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_154
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162410..164038)
DNA (1629bp) protein (543aa)
putative acyl-CoA synthetase (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSF9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41278.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1153_curated_155
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164181..165017
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKK9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41279.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1153_curated_156
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(165069..165752)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJS1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP08536.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ErfK/YbiS/YcfS/YnhG family protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_157
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(165986..166660)
DNA (675bp) protein (225aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9A0_9BRAD
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EFI50738.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ErfK/YbiS/YcfS/YnhG family protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_158
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167243..167980
DNA (738bp) protein (246aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJS3_9BRAD
Magnesium and cobalt transport protein CorA {ECO:0000313|EMBL:EGP08538.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
corA; magnesium transport protein CorA; K03284 magnesium transporter
SCNpilot_expt_1000_bf_scaffold_1153_curated_159
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167981..170767)
DNA (2787bp) protein (929aa)
ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
DNA ligase D n=1 Tax=Afipia broomeae ATCC 49717 PF92_9BRAD">RepID=K8PF92_9BRAD
DNA ligase D {ECO:0000313|EMBL:EKS41282.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1153_curated_160
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170814..171689
DNA (876bp) protein (292aa)
Probable DNA repair protein HMPREF9695_00375 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSG4_9BRAD
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Ku-like protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_161
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171691..172146)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKL4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41284.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative transcriptional regulator protein, MarR family
SCNpilot_expt_1000_bf_scaffold_1153_curated_162
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172374..172799
DNA (426bp) protein (142aa)
Peroxiredoxin, Ohr subfamily n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PP66_9BRAD
Peroxiredoxin, Ohr subfamily {ECO:0000313|EMBL:EKS41285.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
organic hydroperoxide resistance protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_163
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172896..173660)
DNA (765bp) protein (255aa)
oxidoreductase n=1 Tax=Afipia birgiae RepID=UPI00030F4122
Uncharacterized protein {ECO:0000313|EMBL:EKS41286.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_1000_bf_scaffold_1153_curated_164
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173697..174338)
DNA (642bp) protein (214aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5); K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Afipia broomeae ATCC 49717 PF96_9BRAD">RepID=K8PF96_9BRAD
SCNpilot_expt_1000_bf_scaffold_1153_curated_165
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174354..174875
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSG9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41288.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_166
unknown

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comp(174872..175663)
DNA (792bp) protein (264aa)

This feature has no annotations

Displaying items 151-166 of 166 in total

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