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SCNpilot_expt_1000_bf_scaffold_1153_curated

Search features with annotation key words

Displaying items 121-150 of 166 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1153_curated_121
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125481..126428
DNA (948bp) protein (316aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
glyS; glycyl-tRNA synthetase subunit beta (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
Glycine--tRNA ligase beta subunit n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJM7_9BRAD
SCNpilot_expt_1000_bf_scaffold_1153_curated_122
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126425..127711
DNA (1287bp) protein (429aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
Glycyl-tRNA synthetase, beta subunit n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VEA7_RHOPX
SCNpilot_expt_1000_bf_scaffold_1153_curated_123
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127954..129060
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIB0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41241.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_124
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129177..129539)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031DDC77
Uncharacterized protein {ECO:0000313|EMBL:EGP08623.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_125
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129811..129951
DNA (141bp) protein (47aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NUR3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32886.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_126
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130131..132488
DNA (2358bp) protein (786aa)
Pyruvate-phosphate dikinase {ECO:0000313|EMBL:EGP08594.1}; EC=2.7.9.1 {ECO:0000313|EMBL:EGP08594.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
pyruvate phosphate dikinase; K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1]
Pyruvate-phosphate dikinase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJN3_9BRAD
SCNpilot_expt_1000_bf_scaffold_1153_curated_127
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132488..133018
DNA (531bp) protein (177aa)
Pyruvate phosphate dikinase {ECO:0000313|EMBL:KJC41475.1}; EC=2.7.9.1 {ECO:0000313|EMBL:KJC41475.1};; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
pyruvate phosphate dikinase; K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1]
pyruvate phosphate dikinase n=1 Tax=Afipia birgiae RepID=UPI0002FDF04C
SCNpilot_expt_1000_bf_scaffold_1153_curated_128
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133467..134897
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P392_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32888.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
cell wall hydrolase, SleB
SCNpilot_expt_1000_bf_scaffold_1153_curated_129
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135060..136136
DNA (1077bp) protein (359aa)
alcohol dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI00030469D8
Uncharacterized protein {ECO:0000313|EMBL:EKS41249.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
zinc-binding alcohol dehydrogenase rbh
SCNpilot_expt_1000_bf_scaffold_1153_curated_130
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136200..136742
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8P396_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32893.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_131
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136862..139504)
DNA (2643bp) protein (881aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJP1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP08602.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_132
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139580..140086)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSD9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41253.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_133
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140145..140762)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P1V9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32408.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
metal dependent phosphohydrolase; K06952
SCNpilot_expt_1000_bf_scaffold_1153_curated_134
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140759..141382)
DNA (624bp) protein (208aa)
3-methyladenine DNA glycosylase; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
DNA-3-methyladenine glycosylase I n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NV97_9BRAD
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:EKS32409.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_1153_curated_135
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141379..142257)
DNA (879bp) protein (293aa)
Folate-binding protein YgfZ n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NY97_9BRAD
Folate-binding protein YgfZ {ECO:0000313|EMBL:EKS32410.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
glycine cleavage T protein (aminomethyl transferase); K06980
SCNpilot_expt_1000_bf_scaffold_1153_curated_136
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142361..143749
DNA (1389bp) protein (463aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3]
dihydroorotase n=1 Tax=Afipia birgiae RepID=UPI00037BF2D7
Dihydroorotase {ECO:0000256|SAAS:SAAS00252556}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCNpilot_expt_1000_bf_scaffold_1153_curated_137
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143754..146315)
DNA (2562bp) protein (854aa)
Bacteriophytochrome protein n=1 Tax=Rhizobium lupini HPC(L) RepID=K5CLP8_RHILU
Chemotaxis protein CheY {ECO:0000313|EMBL:KGE83836.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
Bacteriophytochrome protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_138
Acetobacter orientalis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146305..146673)
DNA (369bp) protein (123aa)
Heme oxygenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D312_9RHIZ
Heme oxygenase {ECO:0000313|EMBL:GAN66194.1}; TaxID=1231341 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter orientalis 21F-2.;"
heme oxygenase; K07215 heme oxygenase
SCNpilot_expt_1000_bf_scaffold_1153_curated_139
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147724..147990)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002EE4BEE
Uncharacterized protein {ECO:0000313|EMBL:EKS41263.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_140
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148172..148549)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003006756
TIGR02301 family protein {ECO:0000313|EMBL:EKS41264.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_141
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148599..149024)
DNA (426bp) protein (142aa)
GDP-mannose mannosyl hydrolase {ECO:0000313|EMBL:EGP08520.1}; EC=3.6.1.- {ECO:0000313|EMBL:EGP08520.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
adp-ribose pyrophosphatase (EC:3.6.1.13)
GDP-mannose mannosyl hydrolase n=2 Tax=Bradyrhizobiaceae RepID=F7QJQ5_9BRAD
SCNpilot_expt_1000_bf_scaffold_1153_curated_142
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149043..149558)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DC59F5
Uncharacterized protein {ECO:0000313|EMBL:EKS41266.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_143
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149656..150450
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F1394E
Uncharacterized protein {ECO:0000313|EMBL:EKS41267.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_144
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150457..151038)
DNA (582bp) protein (194aa)
YffH/AdpP family nudix-type nucleoside diphosphatase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSF1_9BRAD
YffH/AdpP family nudix-type nucleoside diphosphatase {ECO:0000313|EMBL:EKS41268.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_145
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151061..151522)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKJ9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41269.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative acetyltransferase
SCNpilot_expt_1000_bf_scaffold_1153_curated_146
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151519..152946)
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PP54_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41270.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
FAD linked oxidase-like protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_147
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152987..153976)
DNA (990bp) protein (330aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PID4_9BRAD
hypothetical protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_148
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154308..155330)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DNG1_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KGJ69066.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1153_curated_149
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156206..157933
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSF4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41273.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Sodium/hydrogen exchanger
SCNpilot_expt_1000_bf_scaffold_1153_curated_150
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158071..159147
DNA (1077bp) protein (359aa)
ribB; 3,4-dihydroxy-2-butanone-4-phosphate; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
3,4-dihydroxy-2-butanone-4-phosphate synthase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKK4_9BRAD
3,4-dihydroxy-2-butanone-4-phosphate synthase {ECO:0000313|EMBL:EKS41274.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Displaying items 121-150 of 166 in total

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