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SCNpilot_expt_1000_bf_scaffold_1153_curated_122

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 126425..127711

Top 3 Functional Annotations

Value Algorithm Source
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 442.0
  • Bit_score: 554
  • Evalue 1.80e-154
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14] similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 430.0
  • Bit_score: 547
  • Evalue 4.90e-153
Glycyl-tRNA synthetase, beta subunit n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VEA7_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 430.0
  • Bit_score: 547
  • Evalue 1.60e-152

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
GTGATCCGCGCCCNNNNNNNNNNNNNNNNNNNNNTCTACGAGACTGATCTGAAGAACTGGAAAGACAAGTCTGCAGACGATCTGCTGAAAAAGTTCGACCAGATCGTGTTCCACGAAAAGCTGGGCACGCAAGCCGAACGCATCGCGCGCATCGAACACTTTGGAGCTGGAATCGCCTCATCCATAGGGGCAAACGTCATGCAGGTCCGCCGAGCTGCACAACTATCTAAAGCGGACCTGCTCACGGAAGTTGTTGGCGAATTCCCCGAAGTGCAAGGCTTGATGGGCCGCTACTACGCACTGGCGCAGGGCGAAGACGCTTCTGTCGCTGCCGCGATTGAGGATCACTACAAGCCGCAGGGGCCTGCGGATCGCGTGCCGACCGACCCGGTGGCGATTGCGGTCGCGCTTGCCGATAAGATCGACGCTCTTACAGGCTTTTGGGCTATCGACGAGAAGCCGACAGGCAGCAAAGATCCATATGCGCTGCGGCGTGCTGCGCTTGGGGTTATCAGAATTATTCTTGATAATCGATTGCGCATTAACCTGCTTAAGCAAAGTCTTGCGCAGATTGCCTGGCATATTGCGGGGATGCACCTCGCTCGTTTAGCTCAGGCTCGGAAAGCCATCGCTGAACTAGAGAAAACCAACCTCGACGAGAGAGAGATTCAGCGCCTTCGTTCTTTAATTTCGCACGAGCTATCAGATGAAAGAGCAAGAGAGTTAAGCGACGAAACCGTCTCTACGTCATGGGTTAGGGTGAATGATCTTCTCGCCTTCTTCGCGGATCGCCTGAAGGTCCAGCTTCGCGATCAGGGTGCGCGGCATGATCTGGTGGACGCCGTGTTTGCGCTCGAAGGTCAGGACGATCTCTTGATGGTTGTCCGCCGCGTCGAGGCGCTGGGCAAATTCCTCGACAGCGATGACGGCAAGAACCTGCTCGCGGGCACCAAGCGCGCGTCGAACATTCTCGCCATCGAGGAGAAGAAGGACAAGCGCACCTTCGACGGCGCGCCGGATGCGTCGCTGTTCAAACTCGATGAAGAGAAAAAGCTCGCCGCCGCTATCGATCAGGTGAAGGCGGAAGCGGGTGCGGCCGTGGCCAAGGAAGACTTTGCGTCGGCCATGAGTGCGATGGCCAAACTGCGGCCGGCGGTGGATGCCTTCTTCGACAAGGTGAAGGTCAACGACGACGACAGGGCCGTGCGTGAAAACCGCCTCAAGCTGCTGAACGAAATTCGCGCCGCGACCCGCGCGGTGGCGGACTTCTCGAAGATTCAGGACTGA
PROTEIN sequence
Length: 429
VIRAXXXXXXXXYETDLKNWKDKSADDLLKKFDQIVFHEKLGTQAERIARIEHFGAGIASSIGANVMQVRRAAQLSKADLLTEVVGEFPEVQGLMGRYYALAQGEDASVAAAIEDHYKPQGPADRVPTDPVAIAVALADKIDALTGFWAIDEKPTGSKDPYALRRAALGVIRIILDNRLRINLLKQSLAQIAWHIAGMHLARLAQARKAIAELEKTNLDEREIQRLRSLISHELSDERARELSDETVSTSWVRVNDLLAFFADRLKVQLRDQGARHDLVDAVFALEGQDDLLMVVRRVEALGKFLDSDDGKNLLAGTKRASNILAIEEKKDKRTFDGAPDASLFKLDEEKKLAAAIDQVKAEAGAAVAKEDFASAMSAMAKLRPAVDAFFDKVKVNDDDRAVRENRLKLLNEIRAATRAVADFSKIQD*