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SCNpilot_expt_1000_bf_scaffold_1914_curated_19

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(16083..16571)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Afipia birgiae RepID=UPI000307A760 similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 166.0
  • Bit_score: 264
  • Evalue 5.90e-68
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 163.0
  • Bit_score: 264
  • Evalue 8.20e-68
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 164.0
  • Bit_score: 255
  • Evalue 1.10e-65

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGTTCGCAGTCATCAAAACCGGCGGCCGGCAGTTCCGCGTCGTTCCGGATGATGTTCTTGAAATTGGCAAGATCGCCGGCGATGTCGGCTCGATCGTGCAGCTCGGCGAAGTGCTGGTGGTCGGTGGCGATACGCCGGTCCTCGGTGTCCCGTTCGTTGCGGGCGCGTCGGTTGCCGCCGAAGTGCTGGACCACAAGCGCGGCCCGAAGGTCATCGCCTTCAAGAAGCGCCGCCGCAAGAATTCGAAGCGCAAGCGCGGCTATCGTGACGAGATCACGGTGATCCGCGTCACCGAGATCCTGACCGACGGCAAGGCCCCGAGCGTGGGTCCGCGCGCGAAGAAGGAAAAGCCGGTGGCTGCTGCGCCGGAAGCCGGCGACGAAGCCCCGAAGGCGAAGAAGGCTCCGGCCAAGAAGGCCGCGCCCAAGGCCGCCAAGCCCGCGGCGGCGAAAAAGCCGGCCGCCAAGGCGAAACCTGAGAAAAAGTGA
PROTEIN sequence
Length: 163
MFAVIKTGGRQFRVVPDDVLEIGKIAGDVGSIVQLGEVLVVGGDTPVLGVPFVAGASVAAEVLDHKRGPKVIAFKKRRRKNSKRKRGYRDEITVIRVTEILTDGKAPSVGPRAKKEKPVAAAPEAGDEAPKAKKAPAKKAAPKAAKPAAAKKPAAKAKPEKK*