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SCNpilot_expt_1000_bf_scaffold_454_curated_11

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 14578..15177

Top 3 Functional Annotations

Value Algorithm Source
fdoG; formate dehydrogenase-O major subunit FdoG (EC:1.2.1.2) similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 200.0
  • Bit_score: 368
  • Evalue 1.10e-99
Molybdopterin oxidoreductase Fe4S4 region n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2X8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 199.0
  • Bit_score: 389
  • Evalue 2.50e-105
Formate dehydrogenase-O major subunit {ECO:0000313|EMBL:CEG07214.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 199.0
  • Bit_score: 389
  • Evalue 3.60e-105

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGAACATGGAACTCTCGCGGCGCTCGTTTATGCTCGGGGCCGGCGCGGGTTTGGCTGGAACGACGCTCGGCGCTCTTGGATTTGGTGAAATCGAAGCCGCCCACGCCCTATCGATCCGGCCTTTCAAACTTGCGCAGACCAAGGAAGTGCGCAGCCAGTGCCCGTACTGTGCTGTGTGCTGCGGAATGATCATCTTCGCAGCCGAGAGCAAGGAAGAAAAAGGCAAGATGGAAGTCACCCATATCGAGGGTGACGTGGACCATCCGGTCAATCGCGGCACCCTCTGCCCGAAGGGTGCGGGCGCGATCGACTACATCAAGTCGAAATCCCGCGTGAAATACCCGATGTATCGCAAGCCCGGCTCGAACAGCTTCGAGCGCGTGAGCTGGGATTTCGCGATGGATCGTATCGCGAAGCTGATGAAGGACGATCGCGACGCGAACTTCGTCGAGAAAAACAAGGACGGCGTCACCGTCAACCGCTGGCTGACGACGGCTTTCCTTGCCGGCAGCTCGGTTGCCAATGAAGGCGGATGGGCAACATTCAAGGTCTCGCGTGGCCTTGGTCTGTTGCAGATCGAAAATCAGGCAAGGATTTGA
PROTEIN sequence
Length: 200
MNMELSRRSFMLGAGAGLAGTTLGALGFGEIEAAHALSIRPFKLAQTKEVRSQCPYCAVCCGMIIFAAESKEEKGKMEVTHIEGDVDHPVNRGTLCPKGAGAIDYIKSKSRVKYPMYRKPGSNSFERVSWDFAMDRIAKLMKDDRDANFVEKNKDGVTVNRWLTTAFLAGSSVANEGGWATFKVSRGLGLLQIENQARI*