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SCNpilot_expt_1000_bf_scaffold_454_curated_12

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 15226..17652

Top 3 Functional Annotations

Value Algorithm Source
fdoG; formate dehydrogenase-O major subunit FdoG (EC:1.2.1.2) similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 808.0
  • Bit_score: 1488
  • Evalue 0.0
Formate dehydrogenase, alpha subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2X7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 808.0
  • Bit_score: 1559
  • Evalue 0.0
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EFI52307.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 808.0
  • Bit_score: 1559
  • Evalue 0.0

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2427
ATGACGAACTCCTGGACGGACATCAAGAACGCTGATCTCGTCTGGATTATGGGTGGTAACGCAGCGGAAGCGCATCCCTGCGGATTCAAGTGGGTCACCGAAGCGAAAGCCGAGCGTGGCGCCAAGCTGATGGTGGTCGATCCGCGGTTCAACCGCTCGGCGGCCATGGCTGACCACTATGCGCCGATCCGTTCGGGATCGGACATCACGTTCCTGTCTGCCGTGATCAACTACCTGCTCACGAACGACAAGATCCATAAAGAGTATGTGCGCAACTACACCAACGCTGCGTTCATTGTGCGCGACGATTTCGAGTTCAACGAAGGACTCTTCTCGGGCTACGACGAAGCCAAGCGCACCTACGACCGCAGCACCTGGGAATACAAGTTCGGACCTGACGGCTTCGCCATTCGCGACATGACGCTGCAGGACCCGCGCTGCGTGTTCCAGTTGATGAAGAAGCACTTCGCACAGTACACGCCGGAGCTGGTCGAGCGCGTTTGCGGCACCCCGAAGGACAAGTTCCAGAAGGTGGCCGACTGGGTGTCGTCGACGGCGAATGGCGAGCGCGCCATGACCATCATGTACGCGCTGGGCTGGACGCAGCATACTCACGGCGCCCAGAACATCCGCTGTGCGGCTATGATCCAGCTCCTGTGCGGCAATATCGGCATCCCCGGCGGCGGCGTGAACGCATTGCGCGGTCACTCCAACGTGCAGGGCATCACCGACGTCGGCACGCTGACGGCAGCCATCCCCGGCTATCTGGCATTGCCGCTCGAAAGTGAGCCGACGCTGGAATCGCATTTGGCCAAGCGCGCCTTCAAGCCGCTGACGCCGAACCAGACCAGCTACTGGCAGAACTACAGGAAGTTCTACGTCTCCTTCCTGAAGAGCCAGTTCGGTGCCAATGCCACCAAGGAGAACGAGTTCGGCTATAACTATCTGCCGAAGCTCGACGGCATTTACGACTGCATCAAGATGTTCGACCTGATGCACCAGGGTAAGACCAACGGACTGCTCTGTCAGGGCTTCAACCCCCTGATGGCGATTCCGAACTCGAACAAGAGCCGCGAGGGTCTCTCGAAGCTCAAGTTCCTGGTCAGCATGGACCCGATCGAAACCGATACGGCCCGGTTCTGGGAGAATCACGGCGAGTTCAACAATGTTGACCCCGCCAAGATCCAGACCGAGGTGTTCATGCTGCCGGTCTCGATGTGGTGCGAGGAAGACGGAAGCGTCACCAACTCCAGCCGCTGCATCCAGTGGAAATGGAAGGCGGCGGATCCTCACTACGAGTCCAAGACCGACATCGAAGTCATGGCCGACCTCTTCATGCGCATTCGCAAGCTGTATGAAAAGGACGGCGGCAAGGGCAAGGAAGCCCTTCTCGCGGTGGACTGGAGCTACAAGGACGCGCTCCATCCGACCCCTGAAGAGCTCCTTACCGAGCTCAACGGCAAGGCGCTCGTGGACCTCAAGGATGCGGACGGCAAGGTGGTGCGTGCTGCCGGTCAGCGGCTCGCCAGCTTTGGCGAAATGCGTGACGACGGTTCGACCGACGGATGTATGTGGATTTACACCGGCGTGTACGGTCCGGCGGGCAATCTCGCCCAGCGTCGCGACAACTCCGATCCGTCGGGTCTCGGTGTCTTCGGCAACTGGGGCTTCTCGTGGCCGGCCAACCGTCGCATCCAGTACAACCGTGCCTCCGCCGATCCCTCGGGCAAGCCGTGGAGCGAAGCGAAGAAGTACATGTACTGGAACGGCGAGCGCTGGACCGGACCGGATGTGCCGGACTACGTGCCGACCATCCCGCCGGAGCGGGCAACCGGTCCGTTCATCATGAACGCAGAGGGTGTTTCGCGTCTCTGGGTTCGTGGCCTGATGGCCGACGGTCCGTTCCCGGTTCACATGGAGCCGTTCGAGTCACCGACGGCCAACCTGGTTTTCCCGAAACTCAAGGGCAATCCGGTCGCTCGCGTGTTCAAGAACGATATGGAGGCCTTTGGTTCGTCCAAGGACTTCCCGATCGTCGGGACCACCTATCGGTTGACCGAGCACTTCCACTACTGGACCAAGACAGTCCATGCGAACGCCGTCTTGCAGCCGGAGTTCTTCGTGGAAATGTCGGAAGCCCTCGCCAAGGAAAAAGGCATCAGAAACGGACAGATGGTCCGCGTCTGGTCCAACCGCGGCGAAGCGAAGGGCAAGGCCGTCGTGACCAAACGCATGGTTCCGTTCAAGATCGACGGAAAGACCGTGCACCAGGTCGGATTGCCGCTGAACTTCGGCTTCATCGGTGAAACCAAGAAGGCCTCGCCGATCAACTCGCTGACCTCCGCGGTCGGCGATTCGAACTCGCAGACGCCTGAATTCAAGGCGTTCCTGGTCAATATCGAACCCATCTCGGGTCCGGCGGTTTAA
PROTEIN sequence
Length: 809
MTNSWTDIKNADLVWIMGGNAAEAHPCGFKWVTEAKAERGAKLMVVDPRFNRSAAMADHYAPIRSGSDITFLSAVINYLLTNDKIHKEYVRNYTNAAFIVRDDFEFNEGLFSGYDEAKRTYDRSTWEYKFGPDGFAIRDMTLQDPRCVFQLMKKHFAQYTPELVERVCGTPKDKFQKVADWVSSTANGERAMTIMYALGWTQHTHGAQNIRCAAMIQLLCGNIGIPGGGVNALRGHSNVQGITDVGTLTAAIPGYLALPLESEPTLESHLAKRAFKPLTPNQTSYWQNYRKFYVSFLKSQFGANATKENEFGYNYLPKLDGIYDCIKMFDLMHQGKTNGLLCQGFNPLMAIPNSNKSREGLSKLKFLVSMDPIETDTARFWENHGEFNNVDPAKIQTEVFMLPVSMWCEEDGSVTNSSRCIQWKWKAADPHYESKTDIEVMADLFMRIRKLYEKDGGKGKEALLAVDWSYKDALHPTPEELLTELNGKALVDLKDADGKVVRAAGQRLASFGEMRDDGSTDGCMWIYTGVYGPAGNLAQRRDNSDPSGLGVFGNWGFSWPANRRIQYNRASADPSGKPWSEAKKYMYWNGERWTGPDVPDYVPTIPPERATGPFIMNAEGVSRLWVRGLMADGPFPVHMEPFESPTANLVFPKLKGNPVARVFKNDMEAFGSSKDFPIVGTTYRLTEHFHYWTKTVHANAVLQPEFFVEMSEALAKEKGIRNGQMVRVWSNRGEAKGKAVVTKRMVPFKIDGKTVHQVGLPLNFGFIGETKKASPINSLTSAVGDSNSQTPEFKAFLVNIEPISGPAV*