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SCNpilot_expt_300_bf_scaffold_228_curated_3

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 441..1721

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbL n=1 Tax=Pseudomonas aeruginosa RepID=UPI0003103086 similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 449.0
  • Bit_score: 784
  • Evalue 4.40e-224
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:AKC05778.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 449.0
  • Bit_score: 784
  • Evalue 6.20e-224
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 451.0
  • Bit_score: 752
  • Evalue 1.00e-214

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGAATGACGTGACCATCATCGACCGCTTCCTCGATACGTTCTCGCGCTACATCGACTCGGGCTTTGGCCTGCTGCATGGCGAGGTGGCGTTTCTGACTGCCACGCTGATCGTCATCGACATGACGATCGCCGGCCTGCTCTGGGCGATGGGCCATGCCACCGGCCAGGGCGAGGACGTGATCGCCAAGCTGATCCGCAAGGTGCTCTACGTCGGCGCCTTCGCCTACATCATCGGCAACTTCAACTGGCTGGCCGGCATCGTGTTCCGTTCGTTCGCGAGCCTGGGCCTGACGGCAAGCGGCTCGACCTTGAGCATGGAGAATTTCCTGCAACCGGGCAGGCTGGCCAAGGTCGGCATCGACGCCGGGGCGCCGATCCTCAAACAGATCGGCGACATGGCGGGATTCCCCGAGGTGTTCGTGAACATCACGCCCATCGTCGTGATGTTCCTCGCGTGGCTGATCGTCCTGCTGTGCTTCTTCGTGCTGGCGATCCAGCTTTTCATCACGCTGATCGAGTTCAAGCTGACGACGCTGGCGGGCTTCGTTCTGGTGCCGTTCGCGCTCTGGAACAAGACCGCGTTCCTCGCTGAAAAGGTCTTGGGCAACGTGGTGTCGTCGGGCATCAAGGTGTTGGTGCTGGCCATCATCGTGGGCATCGGCTCGGGCCTGTTCGCCGAGTTCCAGGTGCAGCCAGCCGAGCCGTCCATCGACCATTCGGTCGTCGTCATGCTGGCCTCGCTGACCCTGCTGGCGCTGGGCATCTTCGGGCCGGGTATTGCGACCGGGTTGGTTTCAGGTGGCCCGCAGCTTGGCGCGGGCGCGATGGCCGGTGCCGCGCTGGGCGCGGCCGGCGCTGCGGTTGCCGTGGGCGCAGCGGCCACGGGCGTCGGTGGCGCCGTCGCAGCCGGCGCACGCATGGCCCCGGCTGCGGCCAAACTGGCCGGCAGCGGTGCTCGCGCGATGGCATCGACCGCCGGCGTGGGCAATGTCGCCAAGACCGGCGCGCAAGCCGCCGGGCAGAAGGTTGCCGATGGCGCACGCTCGATGAAGGAGCGTGTCGCTGCCGCCTTCCGGCCCGATGACGCCGCCGCGTCTGGCGGCCCGCAGGGCGCAGCCGATTCCGCAGCGCCTGCCGCTGCCGAACAGCCCGCCTGGGCCAAACGCCTGCACCGCAGGCAGCAACTCACCCACGCCGCGACCACCGCCGCCCACACGCTGCGCGGTGGCGATGGCGGCAGCTCCAGCCAAGGCCCGAGCCTGCGCGATTCCGATTCATAA
PROTEIN sequence
Length: 427
MNDVTIIDRFLDTFSRYIDSGFGLLHGEVAFLTATLIVIDMTIAGLLWAMGHATGQGEDVIAKLIRKVLYVGAFAYIIGNFNWLAGIVFRSFASLGLTASGSTLSMENFLQPGRLAKVGIDAGAPILKQIGDMAGFPEVFVNITPIVVMFLAWLIVLLCFFVLAIQLFITLIEFKLTTLAGFVLVPFALWNKTAFLAEKVLGNVVSSGIKVLVLAIIVGIGSGLFAEFQVQPAEPSIDHSVVVMLASLTLLALGIFGPGIATGLVSGGPQLGAGAMAGAALGAAGAAVAVGAAATGVGGAVAAGARMAPAAAKLAGSGARAMASTAGVGNVAKTGAQAAGQKVADGARSMKERVAAAFRPDDAAASGGPQGAADSAAPAAAEQPAWAKRLHRRQQLTHAATTAAHTLRGGDGGSSSQGPSLRDSDS*