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SCNpilot_expt_300_bf_scaffold_228_curated_4

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 1733..2437

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbF n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002F0CC74 similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 234.0
  • Bit_score: 463
  • Evalue 1.20e-127
VirB8 protein {ECO:0000313|EMBL:AKC05779.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 234.0
  • Bit_score: 463
  • Evalue 1.70e-127
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 234.0
  • Bit_score: 445
  • Evalue 1.40e-122

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGCGATTCAAAAGACCCCAAGTGCGCTACGCCGACACGCCGCAGCCAGCCACGCCGTACCAAGCCGCCGGCCAGGTGTGGGACGAGCGCATCGGCTCGCCGCGCGTGCAGGCGAAGAACTGGCGCTTGATGGCCTTCGGCTGCCTCGCGCTCGCGCTGCTGATGGCCGGTGGCCTGGTCTGGCGCTCGGCGCAGTCCATCGTCAAGCCCTATGTGATCGAGGTCGATCAGGCTGGGCAGGTGCGTACCGTGGGCGAAGCCGCCACGCCGTACCGGCCCAGCGATGCCCAGGTGGCCTACCACCTGGGCCGCTTCATCGGCCTGGTGCGTTCGCTGTCCATCGACCCCATCGTGGTGCGGCAGAACTGGCTCGATGCCTACAACTACACCACCGACAAGGGCGCCGTGGTGCTCAACGACTACGCCCGCATGAACGACCCGTTCGCGCGCATCGGCAAGGAGTCGGTGACGGTGCAGATCACTTCCGTGACCCGCGCCAGCGACACGTCGTTCAACGTGCGCTGGACGGAGACGCGCTACGTCAACGGCGCACTGGATCGCACCGAACGCTGGAACGCGGTGATTTCCATCGTGCAGCAGACCCCGCGCACCGAGCAGCGGCTGCGCAAGAACCCCTTGGGCATCTACGTCAACGGCCTGTCGTGGAGCCGCGAACTCGATTCATCCGAAGGAGCCAAGCCATGA
PROTEIN sequence
Length: 235
MRFKRPQVRYADTPQPATPYQAAGQVWDERIGSPRVQAKNWRLMAFGCLALALLMAGGLVWRSAQSIVKPYVIEVDQAGQVRTVGEAATPYRPSDAQVAYHLGRFIGLVRSLSIDPIVVRQNWLDAYNYTTDKGAVVLNDYARMNDPFARIGKESVTVQITSVTRASDTSFNVRWTETRYVNGALDRTERWNAVISIVQQTPRTEQRLRKNPLGIYVNGLSWSRELDSSEGAKP*