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SCNpilot_expt_300_bf_scaffold_228_curated_5

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 2434..3426

Top 3 Functional Annotations

Value Algorithm Source
conjugative transfer protein TrbG n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002EF05C7 similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 330.0
  • Bit_score: 631
  • Evalue 3.70e-178
Type IV secretion system protein PtlF {ECO:0000313|EMBL:AKC05780.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 330.0
  • Bit_score: 631
  • Evalue 5.20e-178
p-type conjugative transfer protein trbg similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 330.0
  • Bit_score: 624
  • Evalue 1.90e-176

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGAATCCGTATTTCCGTAAATCCGTTTTGCCGCTGATCCTGCTGGCAACAAGCGTCTTGTTTGCAGGCTGCGCCACGCAAGGCACGCCGCCGCCGGTCATCTCGCTGGATGAGCCCGTGCAGGCCCAGCCGCTGCCCGAGGCACCGAAGCCGGTGGAGGTCGTGACCGTGCCCGAGGTGTTGCCGATGCCGGCGCAGATGAAGCCTGTAGCGGACGCCAAGCCTGCGGCGGAGCCCGCCGACGAAACCGTGCGCGTAGCCCGCGCCAATGCCGAGGCGCGCATTGCGCCCACGCGCGAGGGCTACGTCAATGCCATTCAGGTCTGGCCCTTCACTGATGGCGCACTGTACCAGGTCTATGCGGCCGTGGGCCGCGTGACTGTGATCGCGCTCCAGCCGGGCGAAGAACTGGTGACGGTCGCCGCTGGCGATACCGTGCGCTGGATCGTGGGTGACACATCGAGCGGCAGCGGCGATGCGCTGCGCGTCAATGTGATGGTGAAGCCCATCCGTTCGGGCCTGAAGACCAATCTCGTCATCACGACCAGCCGCCGGACGTACCTGCTGGAGCTGACCTCGACCGAGAAGACGTGGATGGCCTCGGTGTCCTGGGAGTACCCCAAGGACAAGATGCTGGCCCTGCAGCGCCAGGCGCAGGCAGCGAGCGCCGCTGCGCCGGTCGATACCGGCTTGTCGCTGGAGAAGATCCGTTTCCGCTACGCGGTCAGCGGCAGCAATCCGCCGTGGAAGCCGCTGCGCGCTTTTGATGACGGGGAGAAGGTCTACATCCAGTTCCCGCCGGGCATTGCCCAGGGCGAGCTGCCGCCTCTGTTCGTGATCGGCGCGCAGGGTGACGGGCAGTTGGTGAACTACCGATTCCGCTCCCCGTACTACATCGTGGATCGGCTGTTCGGCGCGGCCGAACTGCGCCTGGGCGGGGACAAGAGCGACGTGGTGCGGATCGAACGCACGGATGGCACGCGGAGGAACTGA
PROTEIN sequence
Length: 331
MNPYFRKSVLPLILLATSVLFAGCATQGTPPPVISLDEPVQAQPLPEAPKPVEVVTVPEVLPMPAQMKPVADAKPAAEPADETVRVARANAEARIAPTREGYVNAIQVWPFTDGALYQVYAAVGRVTVIALQPGEELVTVAAGDTVRWIVGDTSSGSGDALRVNVMVKPIRSGLKTNLVITTSRRTYLLELTSTEKTWMASVSWEYPKDKMLALQRQAQAASAAAPVDTGLSLEKIRFRYAVSGSNPPWKPLRAFDDGEKVYIQFPPGIAQGELPPLFVIGAQGDGQLVNYRFRSPYYIVDRLFGAAELRLGGDKSDVVRIERTDGTRRN*