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SCNpilot_expt_300_bf_scaffold_276_curated_213

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(227672..228718)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZW1_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 273.0
  • Bit_score: 469
  • Evalue 2.60e-129
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 273.0
  • Bit_score: 469
  • Evalue 8.10e-130
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEB84664.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 273.0
  • Bit_score: 469
  • Evalue 3.60e-129

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
ATGATGCTCTCCCGCAACCTGCTGGCCTTCATCGCGGTGGCCGAGGAACTGCATTTCGGCAAGGCCGCGCAGCGGCTGCACATCAGCCAGCCGCCGCTGAGCCAGCAGATCCGCCAGTTCGAGGAAGAGGTCGGGGCGCCGCTGCTGGTGCGCACCACGCGCTCGGTGCAGCTCACCCCCGCGGGCCGCCTGATGCTGGAGCGCGCCCACCTGCTGCTGGCCGAGGCGGGCGCCGCGCTGCACTCCGTCCGGCGCCATGCCGTGGGCGACGAGGGCGTGCTCACGCTGGGGTTCACCCACAGCACGGTCTACCGCGTGCTGCCCAGGGTGCTGCACGCCTTTCGGCAGGCATGCCCCGACGTGGTGCTGGAGCTACGGCAGCTCACGTCCGACCTGCTGGTGCAGGAGGTGCGCAGCGGCCGCCTGGACGTGGCGATGCTGCGGTTTTCCTCCTCCATGGAAAGCGCCGACTTGATGTCGCGGGTGGTCACCCACGACCCCATGGTGCTGGTCCTGCCGCTGGGGCATCCGCTCGCGGCGCATCGGCGCGTGCCGGTCCGGCTCCTGCAGGGGCTGCCCTGGGTGGGCTATGAGATACAGGGCGCGCGCTATTTCCATGAACTGGAGGAAAAGGTGCTTGCCGGCGCGCGGGTGCGCCCCAGCGTGCAGCACCGCAGCCTGCTGCCGACCCTGCTTGCCCTGGTGGAGGCCGGCATGGGCGCGGCGCTCGCCCCCNNNNNNNNNNNNNNNNNNNNNGGATGCGGTGCTTTCCTGCGTCTGGGCTGCGGACAACTGCAATCCGGTGGTGCAGCGGTTCCTGGACTGCCTGTCCGATGCGGTGCCGCAGGACGAAAGGGCAGGTTAGAGTGGCGGGCCACGCCACCAGAACGACCCACACGATGCCCCTGCAGTTCCAGCCCGTCGCCTCCGGCGCCCGCCTTGCCGACCAGGTGGCCGATGCCCTGGAGGCCGAGATCCGCGGCGGCCGGCTGGCACCCGGTGCGCGGCTGCCGACCGAGGTGGCGCTGGCAGCGCAGTTCGCCGTGA
PROTEIN sequence
Length: 349
MMLSRNLLAFIAVAEELHFGKAAQRLHISQPPLSQQIRQFEEEVGAPLLVRTTRSVQLTPAGRLMLERAHLLLAEAGAALHSVRRHAVGDEGVLTLGFTHSTVYRVLPRVLHAFRQACPDVVLELRQLTSDLLVQEVRSGRLDVAMLRFSSSMESADLMSRVVTHDPMVLVLPLGHPLAAHRRVPVRLLQGLPWVGYEIQGARYFHELEEKVLAGARVRPSVQHRSLLPTLLALVEAGMGAALAPXXXXXXXGCGAFLRLGCGQLQSGGAAVPGLPVRCGAAGRKGRLEWRATPPERPTRCPCSSSPSPPAPALPTRWPMPWRPRSAAAGWHPVRGCRPRWRWQRSSP*