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SCNpilot_expt_1000_bf_scaffold_4966_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4966_curated_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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527..1990
DNA (1464bp) protein (488aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-]
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
DNA primase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JZ20_HYPDA
SCNpilot_expt_1000_bf_scaffold_4966_curated_2
unknown

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2008..2157
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4966_curated_3
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2205..4205
DNA (2001bp) protein (667aa)
RNA polymerase sigma factor RpoD n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000360350F
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
RNA polymerase sigma factor RpoD
SCNpilot_expt_1000_bf_scaffold_4966_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4407..4790
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NGI5_RHISP
Uncharacterized protein {ECO:0000313|EMBL:KFC63589.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_4966_curated_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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4815..5213
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000317C1A6
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SCNpilot_expt_1000_bf_scaffold_4966_curated_6
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5271..5576
DNA (306bp) protein (102aa)
UPI0003CE59B4 related cluster n=1 Tax=unknown RepID=UPI0003CE59B4
Uncharacterized protein {ECO:0000313|EMBL:ESY95963.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4966_curated_7
Pseudomonas plecoglossicida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5682..6053
DNA (372bp) protein (124aa)
Uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=C1MEU1_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:AJG13747.1}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas plecoglossicida.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4966_curated_8
unknown

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comp(6292..6630)
DNA (339bp) protein (113aa)
Integral membrane protein TerC n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8H7_HYPSM
Integral membrane protein TerC {ECO:0000313|EMBL:CPR20686.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
integral membrane protein TerC
Displaying 8 items

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