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SCNpilot_expt_1000_bf_scaffold_6419_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6419_curated_1
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

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205..840
DNA (636bp) protein (212aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
SCNpilot_expt_1000_bf_scaffold_6419_curated_2
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1002..1574)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003708219
Uncharacterized protein {ECO:0000313|EMBL:AHB50258.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
membrane-associated protein
SCNpilot_expt_1000_bf_scaffold_6419_curated_3
unknown

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comp(1571..2191)
DNA (621bp) protein (207aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6419_curated_4
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2240..2914)
DNA (675bp) protein (225aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGT3_HYPSM
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCB65580.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_6419_curated_5
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2983..3942)
DNA (960bp) protein (320aa)
EF hand repeat-containing protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EZR3_SPHCR
EF hand repeat-containing protein
EF hand repeat-containing protein {ECO:0000313|EMBL:AEG50247.1}; Flags: Precursor;; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
SCNpilot_expt_1000_bf_scaffold_6419_curated_6
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4038..4580)
DNA (543bp) protein (181aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
(glutamate--ammonia-ligase) adenylyltransferase; K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42]
Glutamine-synthetase adenylyltransferase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SEU7_9RHIZ
SCNpilot_expt_1000_bf_scaffold_6419_curated_7
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5860..6138
DNA (279bp) protein (93aa)
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
SCNpilot_expt_1000_bf_scaffold_6419_curated_8
unknown

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7003..7344
DNA (342bp) protein (114aa)

This feature has no annotations

Displaying 8 items

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