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SCNpilot_expt_1000_bf_scaffold_5095_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(2065..2844)

Top 3 Functional Annotations

Value Algorithm Source
Putative periplasmic ligand-binding sensor protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7X9_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 36.0
  • Coverage: 261.0
  • Bit_score: 121
  • Evalue 1.30e-24
periplasmic ligand-binding sensor protein; K09945 hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 261.0
  • Bit_score: 121
  • Evalue 4.00e-25
Putative periplasmic ligand-binding sensor protein {ECO:0000313|EMBL:CCB64790.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.0
  • Coverage: 261.0
  • Bit_score: 121
  • Evalue 1.80e-24

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGGCATTAACCCCAGACGAGCGGCACGCAATCAATGATCTGTTCGCGCGCCTTCAGGCCAATGGTCCAGCCGACAAGGACCCCGAGGCCGACGCGTTGATCAACCAGCTCATGCGGAGAACACCTGACAGCGCCTACATCCTGGTGCAGACCACGCTCATTCAAGAGGCTCATATTGGGGATCTGGAAGGCCGGATCAACGAGCTCGAGGAGCAGCTCGCCAACGCTTCTCGCCCGGCATCGAGCGGTGGCGGCTTCCTCAGTGGCCGGCGCGGCACCGCCCCCCCGCAGCGCGACGACTATGCCGACGACCGCCGCTATGCGGATGACCGCCGGTACGGCGACGACCGCGGCAGCGGCATTCCGCCGATCGGCTCACGCAGCGGCCCAAGTGCGTACGACTCGTCGCCTGAGCCGGCGCGTGGCCCATCATGGAGCAGCGGGCGTCCGCAGTCTCCGCCTCCCGGTCCCGGCCCTGGTACGCCTCCGCCGCAGGCACAGTCGGGCGGTGGTGGCGGCTTCTTCCGCACGGCGGCAGCCATGGCAGCCGGCGTTGCTGGTGGTACGCTTCTCGCCAACAGCCTTGGCGGCATGTTCGGCGGCCCGAAGAGCGGAGAGGCACACGCCGGGCAGAGCGGCAGCGGCTCCACGCCCAATGAGGTGAGCCATCAGGACTCCTCGAACAACGATCCCGGCAACTACGATACCGACTACCACGATGCCGGCGCCGACGATGGTGACGGCGACTGGGGTGGCGGCTCGGACGATATCGATATCTGA
PROTEIN sequence
Length: 260
MALTPDERHAINDLFARLQANGPADKDPEADALINQLMRRTPDSAYILVQTTLIQEAHIGDLEGRINELEEQLANASRPASSGGGFLSGRRGTAPPQRDDYADDRRYADDRRYGDDRGSGIPPIGSRSGPSAYDSSPEPARGPSWSSGRPQSPPPGPGPGTPPPQAQSGGGGGFFRTAAAMAAGVAGGTLLANSLGGMFGGPKSGEAHAGQSGSGSTPNEVSHQDSSNNDPGNYDTDYHDAGADDGDGDWGGGSDDIDI*