ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5095_curated_5

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(3011..3721)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036BED89 similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 225.0
  • Bit_score: 229
  • Evalue 4.00e-57
Rhomboid family protein {ECO:0000313|EMBL:CPR21514.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 231.0
  • Bit_score: 221
  • Evalue 1.50e-54
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 228.0
  • Bit_score: 210
  • Evalue 6.00e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 711
TTGACCCGTGAACCGATCCTGAACGTGCCGGCTGCCGTCGTTGCCGCGCTTGCCGTGTTAATGATTGTGCACGTCGGCATGGCGCGTCTCACCGACGTCGACGACGAGCACCTAGTCTGGGTGCTGGCGTTCATTCCGGCACGCTACGTCGGCCTTGCGGGCGAGCTTCCGGGCGGCCCCCTCGCGTCCTGGACATCATTCCTGACGCATCAGCTCGTTCACGGAGACCTGACGCACCTGTTGATCAACAGTGCGTGGCTGCTGGTGTTCGGGAGCGCGGTAGCACGACGCGTCGGCACGACCCGCTTTTTCCTGTTTGCCGCCGTCTGCGGGATTGCCGGCGCGCTTGCCTTCATGCTCGTGCGATGGGGTGAGGTCGTGCCCATGGTGGGCGCATCGGGGGCGATCTCGGGGCTGATGGCGGCCGGCTTCCGCCTGCTCCTGCCGACGATCGACAACGGCGATTTCCATGAGATGCGTGAGTCGCCGCGCACGGTCCGCCTCGCCACGGTCGGCGAATGCTTTCAAAGCCGGCGCATGCTGTTCGCCATCATCGCGTTCGTCGTGGTGAATTTTCTCGTTGCGTTCGCGGCGCCTGTTTTGACCGATGCCGCCGGCATTGCCTGGGAAGCCCACCTCGGCGGCTTTGCTGCCGGCCTGCTGCTGCTCGGGGTCTTCGATCTGCGCCAGCCGGCAGGGGCGATAACTTAG
PROTEIN sequence
Length: 237
LTREPILNVPAAVVAALAVLMIVHVGMARLTDVDDEHLVWVLAFIPARYVGLAGELPGGPLASWTSFLTHQLVHGDLTHLLINSAWLLVFGSAVARRVGTTRFFLFAAVCGIAGALAFMLVRWGEVVPMVGASGAISGLMAAGFRLLLPTIDNGDFHEMRESPRTVRLATVGECFQSRRMLFAIIAFVVVNFLVAFAAPVLTDAAGIAWEAHLGGFAAGLLLLGVFDLRQPAGAIT*