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SCNpilot_expt_1000_bf_scaffold_26554_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 2220..2525

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein Nham_3906 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGQ1_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 81.0
  • Bit_score: 128
  • Evalue 4.10e-27
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 81.0
  • Bit_score: 128
  • Evalue 1.30e-27
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 81.0
  • Bit_score: 128
  • Evalue 5.80e-27

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
GTGACCTGCCCCGTGGCGCTGTACCCGGCGTCCTCACAGGGCGACAAAACCAATTTCCACCAGATCAACAGAAAGACCGGCAACCGCCTGCGCCAGCAGATGGTCGACGAGGAGACGGGCAAGGTCGTCGACAAGGACGACAAGGGCCGCGGTTACGAACTGCCGAGCGGCAAGTATGTCGAGATCGAGCCGGAGGAACTGGAAGCTGTCGAGGTCGCGAGCACGCACACGATCGATATCGACANNNNNNNNNNNNNNNNNNNNNNNNNGCAAGGGCGGCGAGGAGGCCTTCGCGGTCATCCGTGA
PROTEIN sequence
Length: 102
VTCPVALYPASSQGDKTNFHQINRKTGNRLRQQMVDEETGKVVDKDDKGRGYELPSGKYVEIEPEELEAVEVASTHTIDIDXXXXXXXXXQGRRGGLRGHP*