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SCNpilot_expt_1000_bf_scaffold_26554_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 2616..3011

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein HMPREF9695_00593 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIY3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 125.0
  • Bit_score: 157
  • Evalue 8.20e-36
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 125.0
  • Bit_score: 157
  • Evalue 1.20e-35
Ku protein similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 125.0
  • Bit_score: 140
  • Evalue 3.30e-31

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGCTCGGGACCACACTGCGCTACGATTACGAAGTGCGCGACGAGGCCGAGTTCTTCAAGGGCATCCCGAGCCCGCGCGTCAACAAGGAGATGATCGAACTCGCAAGCCACATCCTCGATAGCAAAGCGGGCCGTTTTGACGCCTCGAAGTTCAAGGACGAGTACGAGCGTGCGCTGCGCAAGCTGGTGAAGCGGAAAGCGTCCGGTAAGGCCATCGAGATGCCAGCTGAAAAGGGAGACCGGGGCAATGTCATCGATCTTATGGAGGCGTTGCGCCAGAGCATGAAGGGCAGGAAGAGCGCGGCATCAAGGGGCAAGTCCAACGGCAAGACGGCGGCTCCAGCCGCAAGCGTAAAAGGGGGTCGTCCAAGGCGGCTGCGTAAGCCCATACATTGA
PROTEIN sequence
Length: 132
MLGTTLRYDYEVRDEAEFFKGIPSPRVNKEMIELASHILDSKAGRFDASKFKDEYERALRKLVKRKASGKAIEMPAEKGDRGNVIDLMEALRQSMKGRKSAASRGKSNGKTAAPAASVKGGRPRRLRKPIH*