ggKbase home page

SCNpilot_expt_1000_bf_scaffold_26554_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 3577..4578

Top 3 Functional Annotations

Value Algorithm Source
ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 316.0
  • Bit_score: 420
  • Evalue 4.10e-115
ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module {ECO:0000313|EMBL:ABQ38247.1}; EC=6.5.1.1 {ECO:0000313|EMBL:ABQ38247.1};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 316.0
  • Bit_score: 420
  • Evalue 1.80e-114
ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EQ03_BRASB similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 316.0
  • Bit_score: 420
  • Evalue 1.30e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. BTAi1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGGCGAAAAGTAAACTAGCCCTCTACCAGCAGAAGCGGGATTTCACGAAGACGCACGAGCCGAGCGGAAAGAATCCAATCGCGCCCGCCGAGTACCCGCGCTTTGTCATCCAGAAGCACGCCGCGACGCGTCTTCACTACGACCTCCGGCTGGAGGTGGACGGCGTGTTCAAATCCTGGGCGGTGACGAAGGGTCCGTCGCTCGACCCGGGCGAGAAGCGTCTTGCCGTCGAAACCGAGGACCATCCACTCGACTACGGCGATTTCGAAGGCACCATTCCTAAGGGCGAGTATGGCGGCGGCACGGTCATGCTCTGGGACCGCGGCTTTTGGGCGGCCGACGGCGATGCGTCTAAAGCGCTGCGTAAAGGCGAGCTACGCTTCACCCTCGTCGGTGAGAAGCTGCAGGGCAGCTGGGTGCTTGTGCGGCTTCGTAACGACCGCGAAGGCGGCAAGCGCACCAACTGGCTTCTGATCAAGCGTCACGACGGTTACGAGAAAGCTGGAGTTGACGTACTGGAAGAGGATCGCTCCGTCGCCTCCGGACGCGCGATGGACGAGATCGGCGCCGGGAAGGGCCGCAAACCCAAACCTTTCATGCTGGGCAAGGCGAAAAGCTTCGAGGCCGATGCGGTCTGGCGCTCCAACCGGGGCGAGGCCAAGTACGCGCCCGCTCCCAAGGCCCGCGCCGCGGGCGCAAAGAAGAAGTCAGGCAAGAGCGTTTCGATTCCGCCCTTCGTCGCCCCGCAGCTTTGCAAAAGCGTCAGTCGTCCGCCCTCTGGGGAAAACTGGGTCCACGAGATCAAGCTCGATGGCTACCGGATGCAGCTGCGTGTCGAAGACAGTCAGGGCACGATGCGCATGCGCAAGGGCCTCGACTGGACCNNNNNNNNNNNNNNGATTGCATCATCGACGGTGAGGTCGTGGCGCTCGATCACAACAGCGCGCCGGATTTCTCGGCGCTGCAGGCCGCGCTCTCCGAAGGCCGGGCCAGCGACCTGA
PROTEIN sequence
Length: 334
MAKSKLALYQQKRDFTKTHEPSGKNPIAPAEYPRFVIQKHAATRLHYDLRLEVDGVFKSWAVTKGPSLDPGEKRLAVETEDHPLDYGDFEGTIPKGEYGGGTVMLWDRGFWAADGDASKALRKGELRFTLVGEKLQGSWVLVRLRNDREGGKRTNWLLIKRHDGYEKAGVDVLEEDRSVASGRAMDEIGAGKGRKPKPFMLGKAKSFEADAVWRSNRGEAKYAPAPKARAAGAKKKSGKSVSIPPFVAPQLCKSVSRPPSGENWVHEIKLDGYRMQLRVEDSQGTMRMRKGLDWTXXXXXIASSTVRSWRSITTARRISRRCRPRSPKAGPAT*